Difference between revisions of "CPD-15684"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** sir2-family_protein_hdac...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15684 CPD-15684] == * smiles: ** CCCCCCC=CC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15684 CPD-15684] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCC=CC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** sir2-family_protein_hdac1
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** 5-cis, 7-trans-tetradecadienoyl-CoA
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** histone_deacetylase
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* inchi key:
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** ORF
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** InChIKey=AMANZGDVBADZLH-QTJPLKLFSA-J
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** histone_deacetylase_7a
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* molecular weight:
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** histone_deacetylase_1
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** 969.83   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.98 EC-3.5.1.98]
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* Synonym(s):
 
* Synonym(s):
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** 5Z, 7E-tetradecadienoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14796]]
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** 1 [[Histone-Acetyl-Lysine]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[Histone-L-lysine]][c] '''+''' 1 [[ACET]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a [histone]-N6-acetyl-L-lysine[c] '''+''' 1 H2O[c] '''<=>''' 1 a [histone]-L-lysine[c] '''+''' 1 acetate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17880]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16490]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19850]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10459]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18096]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3315]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12946]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12131]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_727]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17340]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18920]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_275]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17377]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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* PUBCHEM:
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{{#set: common name=sir2-family_protein_hdac1}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659270 90659270]
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{{#set: common name=histone_deacetylase}}
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{{#set: smiles=CCCCCCC=CC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: common name=ORF}}
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{{#set: common name=5-cis, 7-trans-tetradecadienoyl-CoA}}
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{{#set: common name=histone_deacetylase_7a}}
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{{#set: inchi key=InChIKey=AMANZGDVBADZLH-QTJPLKLFSA-J}}
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{{#set: common name=histone_deacetylase_1}}
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{{#set: molecular weight=969.83    }}
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{{#set: ec number=EC-3.5.1.98}}
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{{#set: common name=5Z, 7E-tetradecadienoyl-CoA}}
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{{#set: gene associated=Tiso_gene_17880|Tiso_gene_16490|Tiso_gene_19850|Tiso_gene_10459|Tiso_gene_18096|Tiso_gene_3315|Tiso_gene_12946|Tiso_gene_12131|Tiso_gene_727|Tiso_gene_17340|Tiso_gene_18920|Tiso_gene_275|Tiso_gene_17377}}
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{{#set: consumed by=RXN-14796}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:09, 21 March 2018

Metabolite CPD-15684

  • smiles:
    • CCCCCCC=CC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • 5-cis, 7-trans-tetradecadienoyl-CoA
  • inchi key:
    • InChIKey=AMANZGDVBADZLH-QTJPLKLFSA-J
  • molecular weight:
    • 969.83
  • Synonym(s):
    • 5Z, 7E-tetradecadienoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CC=CCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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