Difference between revisions of "RXN-9843"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17473 RXN-17473] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin_synthase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9843 RXN-9843] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17473 RXN-17473] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9843 RXN-9843] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** biotin_synthase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CPD-5662]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CH33ADO]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[BIOTIN]][c]
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** 2 [[Reduced-adrenal-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-10586]][c] '''=>''' 1 [[CPD-10587]][c] '''+''' 2 [[Oxidized-adrenal-ferredoxins]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
** 1 9-mercaptodethiobiotin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 5'-deoxyadenosine[c] '''+''' 1 H+[c] '''+''' 1 L-methionine[c] '''+''' 1 biotin[c]
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** 2 a reduced  adrenodoxin[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 (25R)-5β-cholestane-3α,7α,26-triol[c] '''=>''' 1 (25R)-3α,7α-dihydroxy-5β-cholestan-26-al[c] '''+''' 2 an oxidized adrenodoxin[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_10345]]
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* Gene: [[Tiso_gene_18459]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6061]], bile acid biosynthesis, neutral pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6061 PWY-6061]
 +
** '''3''' reactions found over '''29''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[annotation]]
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* Category: [[orthology]]
** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
*** Tool: [[pathwaytools]]
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*** Tool: [[pantograph]]
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04805 R04805]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=biotin_synthase}}
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{{#set: gene associated=Tiso_gene_18459}}
{{#set: gene associated=Tiso_gene_10345}}
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{{#set: in pathway=PWY-6061}}
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=orthology-esiliculosus}}
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:21, 21 March 2018

Reaction RXN-9843

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6061, bile acid biosynthesis, neutral pathway: PWY-6061
    • 3 reactions found over 29 reactions in the full pathway

Reconstruction information

External links