Difference between revisions of "METHIONINE--TRNA-LIGASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_4337 == * left end position: ** 12060 * transcription direction: ** POSITIVE * right end position: ** 14128 * centisome position: ** 80.330...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4337 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE--TRNA-LIGASE-RXN METHIONINE--TRNA-LIGASE-RXN] ==
−
* left end position:
+
* direction:
−
** 12060
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** methionyl-trna_synthetase
−
* right end position:
+
* ec number:
−
** 14128
+
** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
−
* centisome position:
+
−
** 80.330376   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[2.7.11.18-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Elongation-tRNAMet]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-MET-tRNAs]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 ATP[c] '''+''' 1 L-methionine[c] '''+''' 1 elongator tRNAmet[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-methionyl-[elongator tRNAmet][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_284]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_406]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=12060}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13481 13481]
−
{{#set: right end position=14128}}
+
* LIGAND-RXN:
−
{{#set: centisome position=80.330376    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03659 R03659]
−
{{#set: reaction associated=2.7.11.18-RXN}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P56127 P56127]
 +
** [http://www.uniprot.org/uniprot/Q44951 Q44951]
 +
** [http://www.uniprot.org/uniprot/P47267 P47267]
 +
** [http://www.uniprot.org/uniprot/O84035 O84035]
 +
** [http://www.uniprot.org/uniprot/O28819 O28819]
 +
** [http://www.uniprot.org/uniprot/O58721 O58721]
 +
** [http://www.uniprot.org/uniprot/O83776 O83776]
 +
** [http://www.uniprot.org/uniprot/O33925 O33925]
 +
** [http://www.uniprot.org/uniprot/Q58659 Q58659]
 +
** [http://www.uniprot.org/uniprot/O66738 O66738]
 +
** [http://www.uniprot.org/uniprot/Q9ZCP0 Q9ZCP0]
 +
** [http://www.uniprot.org/uniprot/Q9PP85 Q9PP85]
 +
** [http://www.uniprot.org/uniprot/O26687 O26687]
 +
** [http://www.uniprot.org/uniprot/O67298 O67298]
 +
** [http://www.uniprot.org/uniprot/Q9JWP0 Q9JWP0]
 +
** [http://www.uniprot.org/uniprot/Q9ZKG9 Q9ZKG9]
 +
** [http://www.uniprot.org/uniprot/Q9Z959 Q9Z959]
 +
** [http://www.uniprot.org/uniprot/Q9CHE0 Q9CHE0]
 +
** [http://www.uniprot.org/uniprot/P43828 P43828]
 +
** [http://www.uniprot.org/uniprot/P56192 P56192]
 +
** [http://www.uniprot.org/uniprot/Q50319 Q50319]
 +
** [http://www.uniprot.org/uniprot/P23920 P23920]
 +
** [http://www.uniprot.org/uniprot/P75091 P75091]
 +
** [http://www.uniprot.org/uniprot/Q55729 Q55729]
 +
** [http://www.uniprot.org/uniprot/P22438 P22438]
 +
** [http://www.uniprot.org/uniprot/P00958 P00958]
 +
** [http://www.uniprot.org/uniprot/P00959 P00959]
 +
** [http://www.uniprot.org/uniprot/Q9M2T9 Q9M2T9]
 +
** [http://www.uniprot.org/uniprot/O23761 O23761]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=methionyl-trna_synthetase}}
 +
{{#set: ec number=EC-6.1.1.10}}
 +
{{#set: gene associated=Tiso_gene_284|Tiso_gene_406}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:23, 21 March 2018

Reaction METHIONINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionyl-trna_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-methionine[c] + 1 elongator tRNAmet[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-methionyl-[elongator tRNAmet][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=METHIONINE--TRNA-LIGASE-RXN&oldid=48325"