Difference between revisions of "SER"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_12899 == * left end position: ** 3684 * transcription direction: ** NEGATIVE * right end position: ** 6537 * centisome position: ** 55.3984...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] == * smiles: ** C(O)C([N+])C(=O)[O-] * common name: ** L-serine * inchi key: ** InChIK...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Metabolite]]
== Gene Tiso_gene_12899 ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] ==
* left end position:
+
* smiles:
** 3684
+
** C(O)C([N+])C(=O)[O-]
* transcription direction:
+
* common name:
** NEGATIVE
+
** L-serine
* right end position:
+
* inchi key:
** 6537
+
** InChIKey=MTCFGRXMJLQNBG-REOHCLBHSA-N
* centisome position:
+
* molecular weight:
** 55.398495    
+
** 105.093    
 
* Synonym(s):
 
* Synonym(s):
 +
** S
 +
** serine
 +
** ser
 +
** L-ser
  
== Reactions associated ==
+
== Reaction(s) known to consume the compound ==
* [[ADPA]]
+
* [[RXN-5641]]
** [[pantograph]]-[[creinhardtii]]
+
* [[RME144]]
* [[APYRASE-RXN]]
+
* [[RXN0-4083]]
** in-silico_annotation
+
* [[RXN0-2382]]
***ec-number
+
* [[SERINE--TRNA-LIGASE-RXN]]
** experimental_annotation
+
* [[RXN0-2161]]
***ec-number
+
* [[5.1.1.18-RXN]]
* [[ATPASE-RXN]]
+
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
** in-silico_annotation
+
* [[4.3.1.17-RXN]]
***ec-number
+
* [[TRYPSYN-RXN]]
** experimental_annotation
+
* [[SERINE-O-ACETTRAN-RXN]]
***ec-number
+
== Reaction(s) known to produce the compound ==
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN0-5114]]
* [[ATPPH]]
+
* [[RXN-14136]]
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN0-4083]]
* [[CTPH]]
+
== Reaction(s) of unknown directionality ==
** [[pantograph]]-[[creinhardtii]]
+
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
* [[DTNH]]
+
* [[GLYOHMETRANS-RXN]]
** [[pantograph]]-[[creinhardtii]]
+
* [[GDPA]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[GTPA]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[NUCLEOSIDE-DIPHOSPHATASE-RXN]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-10862]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN-12195]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-12196]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-12197]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-12198]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN-12199]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-12200]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14003]]
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN-14024]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14187]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14195]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14198]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14199]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14200]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14201]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14205]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14208]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14213]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN-14214]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14215]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14216]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14217]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14218]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14219]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-14220]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN0-3542]]
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[RXN0-5073]]
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[RXN0-5462]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[esiliculosus]]
+
* [[THYMIDINE-TRIPHOSPHATASE-RXN]]
+
** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[UPH]]
+
** [[pantograph]]-[[creinhardtii]]
+
* [[UTPH]]
+
** [[pantograph]]-[[creinhardtii]]
+
== Pathways associated ==
+
* [[PWY-7210]]
+
* [[PWY-7198]]
+
* [[PWY-7177]]
+
* [[PWY-7185]]
+
* [[PWY-7184]]
+
* [[PWY-6545]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=3684}}
+
* CAS : 56-45-1
{{#set: transcription direction=NEGATIVE}}
+
* BIGG : ser__L
{{#set: right end position=6537}}
+
* PUBCHEM:
{{#set: centisome position=55.398495   }}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857581 6857581]
{{#set: reaction associated=ADPA|APYRASE-RXN|ATPASE-RXN|ATPPH|CTPH|DTNH|GDPA|GTPA|GUANOSINE-DIPHOSPHATASE-RXN|NUCLEOSIDE-DIPHOSPHATASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-10862|RXN-12195|RXN-12196|RXN-12197|RXN-12198|RXN-12199|RXN-12200|RXN-14003|RXN-14024|RXN-14187|RXN-14195|RXN-14198|RXN-14199|RXN-14200|RXN-14201|RXN-14205|RXN-14208|RXN-14213|RXN-14214|RXN-14215|RXN-14216|RXN-14217|RXN-14218|RXN-14219|RXN-14220|RXN0-3542|RXN0-5073|RXN0-5462|THYMIDINE-TRIPHOSPHATASE-RXN|UPH|UTPH}}
+
* HMDB : HMDB00187
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7177|PWY-7185|PWY-7184|PWY-6545}}
+
* LIGAND-CPD:
 +
** [http://www.genome.jp/dbget-bin/www_bget?C00065 C00065]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=33384 33384]
 +
* METABOLIGHTS : MTBLC33384
 +
{{#set: smiles=C(O)C([N+])C(=O)[O-]}}
 +
{{#set: common name=L-serine}}
 +
{{#set: inchi key=InChIKey=MTCFGRXMJLQNBG-REOHCLBHSA-N}}
 +
{{#set: molecular weight=105.093   }}
 +
{{#set: common name=S|serine|ser|L-ser}}
 +
{{#set: consumed by=RXN-5641|RME144|RXN0-4083|RXN0-2382|SERINE--TRNA-LIGASE-RXN|RXN0-2161|5.1.1.18-RXN|SERINE-C-PALMITOYLTRANSFERASE-RXN|4.3.1.17-RXN|TRYPSYN-RXN|SERINE-O-ACETTRAN-RXN}}
 +
{{#set: produced by=RXN0-5114|RXN-14136|RXN0-4083}}
 +
{{#set: reversible reaction associated=CYSTATHIONINE-BETA-SYNTHASE-RXN|GLYOHMETRANS-RXN}}

Latest revision as of 20:24, 21 March 2018

Metabolite SER

  • smiles:
    • C(O)C([N+])C(=O)[O-]
  • common name:
    • L-serine
  • inchi key:
    • InChIKey=MTCFGRXMJLQNBG-REOHCLBHSA-N
  • molecular weight:
    • 105.093
  • Synonym(s):
    • S
    • serine
    • ser
    • L-ser

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 56-45-1
  • BIGG : ser__L
  • PUBCHEM:
  • HMDB : HMDB00187
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC33384
"C(O)C([N+])C(=O)[O-" cannot be used as a page name in this wiki.