Difference between revisions of "Tiso gene 8353"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** udp-glucose--undeca...")
(Created page with "Category:Gene == Gene Tiso_gene_8353 == * right end position: ** 6959 * transcription direction: ** NEGATIVE * left end position: ** 4577 * centisome position: ** 44.35937...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.117-RXN 2.4.1.117-RXN] ==
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== Gene Tiso_gene_8353 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6959
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* common name:
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* transcription direction:
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** udp-glucose--undecaprenyl-phosphate_glucosyltransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.117 EC-2.4.1.117]
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** 4577
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* centisome position:
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** 44.35937   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[LYSOPHOSPHOLIPASE-RXN]]
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** 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[CPD-166]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a dolichyl phosphate[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c]
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* Reaction: [[RXN-15035]]
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** Source: [[annotation-experimental_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_8160]]
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* [[PWY-7409]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6959}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15401 15401]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=4577}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01005 R01005]
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{{#set: centisome position=44.35937    }}
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* UNIPROT:
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{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
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** [http://www.uniprot.org/uniprot/P40350 P40350]
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{{#set: pathway associated=PWY-7409}}
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** [http://www.uniprot.org/uniprot/Q9UUT0 Q9UUT0]
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** [http://www.uniprot.org/uniprot/Q9Y673 Q9Y673]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=udp-glucose--undecaprenyl-phosphate_glucosyltransferase}}
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{{#set: ec number=EC-2.4.1.117}}
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{{#set: gene associated=Tiso_gene_8160}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:06, 21 March 2018

Gene Tiso_gene_8353

  • right end position:
    • 6959
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 4577
  • centisome position:
    • 44.35937
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8353&oldid=39541"