Difference between revisions of "VALSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14026 RXN-14026] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_deoxy_cytosolic_type_c_pr...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TA...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14026 RXN-14026] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
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** 5_deoxy_cytosolic_type_c_protein
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** L-valine biosynthesis
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** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
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** ORF
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** 5_-nucleotidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.91 EC-3.1.3.91]
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTIDINE]][c] '''+''' 1 [[Pi]][c]
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* [[ACETOLACTREDUCTOISOM-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 CMP[c] '''+''' 1 H2O[c] '''=>''' 1 cytidine[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_10173]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_13929]]
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*** [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* [[ACETOLACTSYN-RXN]]
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***EC-NUMBER
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_11362]]
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* [[Tiso_gene_14435]]
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** 2 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[manual-primary_network]]
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***EC-NUMBER
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_14246]]
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** IN-SILICO_ANNOTATION
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_18403]]
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* [[Tiso_gene_14434]]
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*** [[Tiso_gene_14984]]
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** IN-SILICO_ANNOTATION
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** 5 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_6988]]
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*** [[manual-primary_network]]
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** IN-SILICO_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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* [[Tiso_gene_5911]]
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* [[DIHYDROXYISOVALDEHYDRAT-RXN]]
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** IN-SILICO_ANNOTATION
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** 1 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_1563]]
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* [[Tiso_gene_6640]]
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** 4 reconstruction source(s) associated:
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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*** [[manual-primary_network]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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*** [[orthology-esiliculosus]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29368 29368]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=L-valine biosynthesis}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: reaction found=4}}
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{{#set: common name=ORF}}
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{{#set: total reaction=4}}
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{{#set: common name=5_-nucleotidase}}
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{{#set: completion rate=100.0}}
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{{#set: ec number=EC-3.1.3.91}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_13929|Tiso_gene_14435|Tiso_gene_14246|Tiso_gene_14434|Tiso_gene_6988|Tiso_gene_5911|Tiso_gene_6640}}
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{{#set: in pathway=PWY-7185}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:32, 21 March 2018

Pathway VALSYN-PWY

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=VALSYN-PWY&oldid=42295"