Difference between revisions of "Tiso gene 2775"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5961 RXN-5961] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:Gene == Gene Tiso_gene_2775 == * right end position: ** 17424 * transcription direction: ** POSITIVE * left end position: ** 16196 * centisome position: ** 87.640...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5961 RXN-5961] ==
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== Gene Tiso_gene_2775 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 17424
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.99 EC-1.14.99]
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** POSITIVE
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* left end position:
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** 16196
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* centisome position:
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** 87.64070   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-118]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-5661]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 oxygen[c] '''+''' 1 α-carotene[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 zeinoxanthin[c] '''+''' 1 H2O[c]
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** Source: [[orthology-athaliana]]
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* Reaction: [[GST-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: automated-name-match
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* Gene: [[Tiso_gene_8]]
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* Reaction: [[RXN-13673]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_9613]]
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*** Assignment: automated-name-match
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-15680]]
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* Gene: [[Tiso_gene_4]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: automated-name-match
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== Pathways ==
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== Pathways associated ==
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* [[PWY-5947]], lutein biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5947 PWY-5947]
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* [[PWY-7112]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6842]]
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== Reconstruction information  ==
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* [[PWY-4061]]
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* Category: [[orthology]]
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* [[PWY-7533]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=17424}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07530 R07530]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=16196}}
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{{#set: ec number=EC-1.14.99}}
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{{#set: centisome position=87.64070    }}
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{{#set: gene associated=Tiso_gene_8|Tiso_gene_9613|Tiso_gene_4}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: in pathway=PWY-5947}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:26, 21 March 2018

Gene Tiso_gene_2775

  • right end position:
    • 17424
  • transcription direction:
    • POSITIVE
  • left end position:
    • 16196
  • centisome position:
    • 87.64070
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2775&oldid=41644"