Difference between revisions of "RXN-8675"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-13819 TAX-1...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** uroporphyrinogen methyltransfe...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8675 RXN-8675] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-13819 TAX-13819]
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** diploterol and cycloartenol biosynthesis
+
 
* Synonym(s):
 
* Synonym(s):
−
** 22-hydroxyphopane-1 biosynthesis
+
** uroporphyrinogen methyltransferase
−
** cycloartenol biosynthesis
+
** uroporphyrinogen-III methyltransferase
−
** diploterol biosynthesis
+
** adenosylmethionine-uroporphyrinogen III methyltransferase
 +
** S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
 +
** SirA
 +
** CysG
 +
** uroporphyrin-III C-methyltransferase (incorrect)
 +
** S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''2''' reaction(s) found
+
* With identifiers:
−
** [[CYCLOARTENOL-SYNTHASE-RXN]]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-9038]][c] '''=>''' 1 [[DIHYDROSIROHYDROCHLORIN]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
−
** [[5.4.99.17-RXN]]
+
* With common name(s):
−
== Reaction(s) not found ==
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 precorrin-1[c] '''=>''' 1 precorrin-2[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
−
* '''2''' reaction(s) not found
+
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN]
+
== Genes associated with this reaction  ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-4961 RXN-4961]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_8614]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7376]], cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7376 PWY-7376]
 +
** '''2''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7377 PWY-7377]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5194]], siroheme biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5194 PWY-5194]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5196]], factor 430 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-13819}}
+
* RHEA:
−
{{#set: common name=diploterol and cycloartenol biosynthesis}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21972 21972]
−
{{#set: common name=22-hydroxyphopane-1 biosynthesis|cycloartenol biosynthesis|diploterol biosynthesis}}
+
* LIGAND-RXN:
−
{{#set: reaction found=2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07238 R07238]
−
{{#set: reaction not found=2}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=uroporphyrinogen methyltransferase|uroporphyrinogen-III methyltransferase|adenosylmethionine-uroporphyrinogen III methyltransferase|S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase|SirA|CysG|uroporphyrin-III C-methyltransferase (incorrect)|S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)}}
 +
{{#set: gene associated=Tiso_gene_8614}}
 +
{{#set: in pathway=PWY-7376|PWY-7377|PWY-5194|PWY-5196}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:34, 21 March 2018

Reaction RXN-8675

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • uroporphyrinogen methyltransferase
    • uroporphyrinogen-III methyltransferase
    • adenosylmethionine-uroporphyrinogen III methyltransferase
    • S-adenosyl-L-methionine-dependent uroporphyrinogen III methylase
    • SirA
    • CysG
    • uroporphyrin-III C-methyltransferase (incorrect)
    • S-adenosyl-L-methionine:uroporphyrin-III C-methyltransferase (incorrect)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7376, cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation): PWY-7376
    • 2 reactions found over 13 reactions in the full pathway
  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion): PWY-7377
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-5194, siroheme biosynthesis: PWY-5194
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5196, factor 430 biosynthesis: PWY-5196
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8675&oldid=42488"