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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5901 RXN-5901] == | + | == Gene Tiso_gene_10561 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** polyketide_synthase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.36 EC-1.1.1.36]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]] |
| − | ** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ACETOACETYL-COA]][c] '''=>''' 1 [[CPD-650]][c] '''+''' 1 [[NADP]][c]
| + | ** Source: [[orthology-athaliana]] |
| − | * With common name(s):
| + | ** Source: [[orthology-esiliculosus]] |
| − | ** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 acetoacetyl-CoA[c] '''=>''' 1 (3R)-3-hydroxybutanoyl-CoA[c] '''+''' 1 NADP+[c]
| + | == Pathways associated == |
| − | | + | * [[PWY-6792]] |
| − | == Genes associated with this reaction ==
| + | * [[PWY-1121]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | * [[PWY-5710]] |
| − | * Gene: [[Tiso_gene_500]]
| + | * [[PWY-7498]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | * [[PWY-6039]] |
| − | *** Assignment: EC-NUMBER
| + | * [[PWY-7398]] |
| − | * Gene: [[Tiso_gene_6563]]
| + | * [[PWY-361]] |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_135]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_10876]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_5424]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_13394]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_6562]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_136]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | * Gene: [[Tiso_gene_5425]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]]
| + | |
| − | *** Assignment: EC-NUMBER
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5741]], ethylmalonyl-CoA pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5741 PWY-5741] | + | |
| − | ** '''2''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | * [[PWY1-3]], polyhydroxybutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1-3 PWY1-3] | + | |
| − | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-7216]], (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7216 PWY-7216] | + | |
| − | ** '''3''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[PWY-5676]], acetyl-CoA fermentation to butanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5676 PWY-5676] | + | |
| − | ** '''2''' reactions found over '''7''' reactions in the full pathway | + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-in-silico_annotation]] | + | |
| − | *** Tool: [[pathwaytools]] | + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: reaction associated=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01977 R01977]
| + | {{#set: pathway associated=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}} |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=polyketide_synthase}}
| + | |
| − | {{#set: ec number=EC-1.1.1.36}}
| + | |
| − | {{#set: gene associated=Tiso_gene_500|Tiso_gene_6563|Tiso_gene_135|Tiso_gene_10876|Tiso_gene_5424|Tiso_gene_13394|Tiso_gene_6562|Tiso_gene_136|Tiso_gene_5425}} | + | |
| − | {{#set: in pathway=PWY-5741|PWY1-3|PWY-7216|PWY-5676}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-in-silico_annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
