Difference between revisions of "Tiso gene 19389"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Tiso_gene_19389 == * right end position: ** 2356 * transcription direction: ** POSITIVE * left end position: ** 344 * centisome position: ** 14.55160...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] ==
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== Gene Tiso_gene_19389 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2356
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* common name:
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* transcription direction:
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** -beta-glucan_synthase_component_gls2
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** POSITIVE
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** callose_synthase
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* left end position:
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** callose
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** 344
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** beta-glucan_synthesis-associated
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* centisome position:
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* ec number:
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** 14.551607   
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** [http://enzyme.expasy.org/EC/2.4.1.34 EC-2.4.1.34]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GCVT-RXN]]
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** 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[1-3-beta-D-Glucans]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a 1,3-β-D-glucan[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP[c] '''+''' 1 a 1,3-β-D-glucan[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7966]]
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_5462]]
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== Pathways associated ==
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** Source: [[annotation-in-silico_annotation]]
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* [[GLYCLEAV-PWY]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_7603]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_3322]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5460]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_7967]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6773]], 1,3-β-D-glucan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6773 PWY-6773]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=2356}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03118 R03118]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=344}}
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** [http://www.uniprot.org/uniprot/P38631 P38631]
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{{#set: centisome position=14.551607    }}
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** [http://www.uniprot.org/uniprot/P40989 P40989]
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{{#set: reaction associated=GCVT-RXN}}
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** [http://www.uniprot.org/uniprot/Q10287 Q10287]
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{{#set: pathway associated=GLYCLEAV-PWY}}
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** [http://www.uniprot.org/uniprot/P38678 P38678]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=-beta-glucan_synthase_component_gls2}}
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{{#set: common name=callose_synthase}}
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{{#set: common name=callose}}
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{{#set: common name=beta-glucan_synthesis-associated}}
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{{#set: ec number=EC-2.4.1.34}}
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{{#set: gene associated=Tiso_gene_7966|Tiso_gene_5462|Tiso_gene_7603|Tiso_gene_3322|Tiso_gene_5460|Tiso_gene_7967}}
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{{#set: in pathway=PWY-6773}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Tiso_gene_19389

  • right end position:
    • 2356
  • transcription direction:
    • POSITIVE
  • left end position:
    • 344
  • centisome position:
    • 14.551607
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19389&oldid=43766"