Difference between revisions of "RIBOFLAVINSYNREDUC-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-SYN-RXN GLUTATHIONE-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutath...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** r...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-SYN-RXN GLUTATHIONE-SYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** glutathione_synthetase
+
** riboflavin_biosynthesis_protein
 +
** ORF
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.2.3 EC-6.3.2.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.193 EC-1.1.1.193]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-602]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-1086]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 γ-L-glutamyl-L-cysteine[c] '''+''' 1 ATP[c] '''+''' 1 glycine[c] '''=>''' 1 ADP[c] '''+''' 1 glutathione[c] '''+''' 1 phosphate[c] '''+''' 1 H+[c]
+
** 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_14848]]
+
* Gene: [[Tiso_gene_8035]]
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-athaliana]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
** Source: [[orthology-creinhardtii]]
+
* Gene: [[Tiso_gene_1389]]
−
* Gene: [[Tiso_gene_6905]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_12276]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_6906]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLUTATHIONESYN-PWY]], glutathione biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONESYN-PWY GLUTATHIONESYN-PWY]
+
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-creinhardtii]]
+
** Source: [[orthology-synechocystis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
Line 45: Line 41:
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13557 13557]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17845 17845]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00497 R00497]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03458 R03458]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9JTJ6 Q9JTJ6]
+
−
** [http://www.uniprot.org/uniprot/P46413 P46413]
+
−
** [http://www.uniprot.org/uniprot/P45480 P45480]
+
−
** [http://www.uniprot.org/uniprot/P35667 P35667]
+
−
** [http://www.uniprot.org/uniprot/P35669 P35669]
+
−
** [http://www.uniprot.org/uniprot/P35668 P35668]
+
−
** [http://www.uniprot.org/uniprot/P48637 P48637]
+
−
** [http://www.uniprot.org/uniprot/P46416 P46416]
+
−
** [http://www.uniprot.org/uniprot/P51855 P51855]
+
−
** [http://www.uniprot.org/uniprot/P73493 P73493]
+
−
** [http://www.uniprot.org/uniprot/P04425 P04425]
+
−
** [http://www.uniprot.org/uniprot/O22494 O22494]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutathione_synthetase}}
+
{{#set: common name=riboflavin_biosynthesis_protein}}
−
{{#set: ec number=EC-6.3.2.3}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_14848|Tiso_gene_6905|Tiso_gene_12276|Tiso_gene_6906}}
+
{{#set: ec number=EC-1.1.1.193}}
−
{{#set: in pathway=GLUTATHIONESYN-PWY}}
+
{{#set: gene associated=Tiso_gene_8035|Tiso_gene_1389}}
 +
{{#set: in pathway=RIBOSYN2-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-creinhardtii|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:49, 21 March 2018

Reaction RIBOFLAVINSYNREDUC-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin_biosynthesis_protein
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] + 1 NADPH[c] + 1 H+[c] => 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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