Difference between revisions of "RXN-778"

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(Created page with "Category:Gene == Gene Tiso_gene_14008 == * left end position: ** 2741 * transcription direction: ** POSITIVE * right end position: ** 5798 * centisome position: ** 46.3319...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-778 RXN-778] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14008 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-778 RXN-778] ==
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* left end position:
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* direction:
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** 2741
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
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* right end position:
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** 5798
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* centisome position:
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** 46.33198   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ISOCIT-CLEAV-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-723]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-724]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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***automated-name-match
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* With common name(s):
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** experimental_annotation
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** 1 H+[c] '''+''' 1 6-deoxocastasterone[c] '''+''' 1 NADPH[c] '''+''' 1 oxygen[c] '''=>''' 1 6α-hydroxy-castasterone[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[P105-PWY]]
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* Gene: [[Tiso_gene_3577]]
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* [[GLYOXYLATE-BYPASS]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6969]]
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* Gene: [[Tiso_gene_8263]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
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** '''11''' reactions found over '''25''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2741}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07450 R07450]
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{{#set: right end position=5798}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=46.33198    }}
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{{#set: ec number=EC-1.14.13}}
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{{#set: reaction associated=ISOCIT-CLEAV-RXN}}
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{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
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{{#set: pathway associated=P105-PWY|GLYOXYLATE-BYPASS|PWY-6969}}
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{{#set: in pathway=PWY-699}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-778

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 6-deoxocastasterone[c] + 1 NADPH[c] + 1 oxygen[c] => 1 6α-hydroxy-castasterone[c] + 1 NADP+[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-699, brassinosteroid biosynthesis I: PWY-699
    • 11 reactions found over 25 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-778&oldid=42761"