Difference between revisions of "RXN-13446"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylami...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13446 RXN-13446] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13446 RXN-13446] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** phosphoribosylaminoimidazole_carboxylase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.21 EC-4.1.1.21]
+
** [http://enzyme.expasy.org/EC/3.1.2 EC-3.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c]
+
** 1 [[CPD-14426]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13792]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 CO2[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''=>''' 2 H+[c] '''+''' 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c]
+
** 1 docosapentaenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentenoate[c] '''+''' 1 coenzyme A[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16011]]
+
* Gene: [[Tiso_gene_7477]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
 
−
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
 
−
** [http://www.uniprot.org/uniprot/O66608 O66608]
 
−
** [http://www.uniprot.org/uniprot/O67239 O67239]
 
−
** [http://www.uniprot.org/uniprot/P12045 P12045]
 
−
** [http://www.uniprot.org/uniprot/P09029 P09029]
 
−
** [http://www.uniprot.org/uniprot/P12044 P12044]
 
−
** [http://www.uniprot.org/uniprot/P21264 P21264]
 
−
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
 
−
** [http://www.uniprot.org/uniprot/P15567 P15567]
 
−
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
 
−
** [http://www.uniprot.org/uniprot/P43849 P43849]
 
−
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
 
−
** [http://www.uniprot.org/uniprot/P43850 P43850]
 
−
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
 
−
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
 
−
** [http://www.uniprot.org/uniprot/P22234 P22234]
 
−
** [http://www.uniprot.org/uniprot/P22348 P22348]
 
−
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
 
−
** [http://www.uniprot.org/uniprot/P55195 P55195]
 
−
** [http://www.uniprot.org/uniprot/P50504 P50504]
 
−
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
 
−
** [http://www.uniprot.org/uniprot/P74724 P74724]
 
−
** [http://www.uniprot.org/uniprot/O80937 O80937]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=phosphoribosylaminoimidazole_carboxylase}}
+
{{#set: ec number=EC-3.1.2}}
−
{{#set: ec number=EC-4.1.1.21}}
+
{{#set: gene associated=Tiso_gene_7477}}
−
{{#set: gene associated=Tiso_gene_16011}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY-6124}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:37, 21 March 2018

Reaction RXN-13446

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 docosapentaenoyl-CoA[c] + 1 H2O[c] => 1 (7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentenoate[c] + 1 coenzyme A[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13446&oldid=42794"