Difference between revisions of "Tiso gene 2386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2386 == * right end position: ** 6336 * transcription direction: ** NEGATIVE * left end position: ** 5150 * centisome position: ** 24.06429...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXY-KYNURENINASE-RXN 3-HYDROXY-KYNURENINASE-RXN] ==
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== Gene Tiso_gene_2386 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6336
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* common name:
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* transcription direction:
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** kynureninase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.7.1.3 EC-3.7.1.3]
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** 5150
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* centisome position:
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** 24.064297   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-11832]]
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** 1 [[3-HYDROXY-L-KYNURENINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[3-HYDROXY-ANTHRANILATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 3-hydroxy-L-kynurenine[c] '''+''' 1 H2O[c] '''=>''' 1 L-alanine[c] '''+''' 1 3-hydroxyanthranilate[c] '''+''' 1 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-12002]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_10684]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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* [[Tiso_gene_10685]]
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* Reaction: [[RXN-7913]]
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** IN-SILICO_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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*** Assignment: ec-number
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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* [[PWY-7205]]
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** '''9''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7197]]
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== Reconstruction information  ==
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* [[PWY-7176]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6336}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25143 25143]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5150}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02668 R02668]
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{{#set: centisome position=24.064297    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=RXN-11832|RXN-12002|RXN-7913}}
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{{#set: common name=kynureninase}}
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{{#set: pathway associated=PWY-7205|PWY-7197|PWY-7176}}
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{{#set: ec number=EC-3.7.1.3}}
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{{#set: gene associated=Tiso_gene_10684|Tiso_gene_10685}}
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{{#set: in pathway=PWY-5651|PWY-6309}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:37, 21 March 2018

Gene Tiso_gene_2386

  • right end position:
    • 6336
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5150
  • centisome position:
    • 24.064297
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2386&oldid=42817"