Difference between revisions of "3.1.4.11-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_210 == * right end position: ** 17588 * transcription direction: ** NEGATIVE * left end position: ** 15045 * centisome position: ** 40.0676...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phospholipase_c_beta_...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_210 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.11-RXN 3.1.4.11-RXN] ==
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* right end position:
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* direction:
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** 17588
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** phospholipase_c_beta_4
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* left end position:
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** 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
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** 15045
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.4.11 EC-3.1.4.11]
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** 40.067646   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[1.1.3.37-RXN]]
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* With identifiers:
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** 1 [[PHOSPHATIDYL-MYO-INOSITOL-45-BISPHOSPHA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSITOL-1-4-5-TRISPHOSPHATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIACYLGLYCEROL]][c]
 +
* With common name(s):
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** 1 a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 D-myo-inositol (1,4,5)-trisphosphate[c] '''+''' 1 H+[c] '''+''' 1 a 1,2-diacyl-sn-glycerol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7561]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Reaction: [[GALACTONOLACTONE-DEHYDROGENASE-RXN]]
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* Gene: [[Tiso_gene_12019]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-13183]]
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* Gene: [[Tiso_gene_12020]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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* Reaction: [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY3O-6]]
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* [[PWY-6367]], D-myo-inositol-5-phosphate metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6367 PWY-6367]
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* [[PWY-6386]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6387]]
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* [[PWY-6351]], D-myo-inositol (1,4,5)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6351 PWY-6351]
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* [[PWY-882]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
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** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: right end position=17588}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03435 R03435]
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{{#set: left end position=15045}}
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* UNIPROT:
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{{#set: centisome position=40.067646    }}
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** [http://www.uniprot.org/uniprot/P10687 P10687]
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{{#set: reaction associated=1.1.3.37-RXN|GALACTONOLACTONE-DEHYDROGENASE-RXN|RXN-13183|UDPNACETYLMURAMATEDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P10894 P10894]
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{{#set: pathway associated=PWY3O-6|PWY-6386|PWY-6387|PWY-882}}
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** [http://www.uniprot.org/uniprot/P10686 P10686]
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** [http://www.uniprot.org/uniprot/P24135 P24135]
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** [http://www.uniprot.org/uniprot/P19174 P19174]
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** [http://www.uniprot.org/uniprot/Q00722 Q00722]
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** [http://www.uniprot.org/uniprot/Q02158 Q02158]
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** [http://www.uniprot.org/uniprot/P32383 P32383]
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** [http://www.uniprot.org/uniprot/Q9TS13 Q9TS13]
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** [http://www.uniprot.org/uniprot/Q24284 Q24284]
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** [http://www.uniprot.org/uniprot/P51178 P51178]
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** [http://www.uniprot.org/uniprot/P10688 P10688]
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** [http://www.uniprot.org/uniprot/P10895 P10895]
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** [http://www.uniprot.org/uniprot/Q60450 Q60450]
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** [http://www.uniprot.org/uniprot/P08487 P08487]
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** [http://www.uniprot.org/uniprot/Q9STZ3 Q9STZ3]
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** [http://www.uniprot.org/uniprot/P40977 P40977]
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** [http://www.uniprot.org/uniprot/Q21754 Q21754]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phospholipase_c_beta_4}}
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{{#set: common name=1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2}}
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{{#set: ec number=EC-3.1.4.11}}
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{{#set: gene associated=Tiso_gene_7561|Tiso_gene_12019|Tiso_gene_12020}}
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{{#set: in pathway=PWY-6367|PWY-6351|PWY-7039|LIPASYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:01, 21 March 2018

Reaction 3.1.4.11-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phospholipase_c_beta_4
    • 1-phosphatidylinositol-_-bisphosphate_phosphodiesterase_gamma-2
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6367, D-myo-inositol-5-phosphate metabolism: PWY-6367
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6351, D-myo-inositol (1,4,5)-trisphosphate biosynthesis: PWY-6351
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7039, phosphatidate metabolism, as a signaling molecule: PWY-7039
    • 2 reactions found over 5 reactions in the full pathway
  • LIPASYN-PWY, phospholipases: LIPASYN-PWY
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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