Difference between revisions of "PWY-5188"

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(Created page with "Category:Gene == Gene Tiso_gene_15686 == * left end position: ** 25 * transcription direction: ** NEGATIVE * right end position: ** 1724 * centisome position: ** 0.5128205...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Pathway]]
== Gene Tiso_gene_15686 ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188] ==
* left end position:
+
* taxonomic range:
** 25
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
* transcription direction:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
** NEGATIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
* right end position:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
** 1724
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
* centisome position:
+
* common name:
** 0.51282054   
+
** tetrapyrrole biosynthesis I (from glutamate)
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction(s) found ==
* [[PGLYCDEHYDROG-RXN]]
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'''6''' reactions found over '''6''' reactions in the full pathway
** [[pantograph]]-[[esiliculosus]]
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* [[GLURS-RXN]]
* [[PSERTRANSAM-RXN]]
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** 2 associated gene(s):
** in-silico_annotation
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*** [[Tiso_gene_5379]]
***ec-number
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*** [[Tiso_gene_5046]]
** experimental_annotation
+
** 4 reconstruction source(s) associated:
***ec-number
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*** [[annotation-experimental_annotation]]
** [[pantograph]]-[[esiliculosus]]
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*** [[manual-primary_network]]
* [[PSERTRANSAMPYR-RXN]]
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*** [[annotation-in-silico_annotation]]
** in-silico_annotation
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*** [[orthology-esiliculosus]]
***ec-number
+
* [[GLUTRNAREDUCT-RXN]]
** experimental_annotation
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** 0 associated gene:
***ec-number
+
** 1 reconstruction source(s) associated:
** [[pantograph]]-[[esiliculosus]]
+
*** [[manual-primary_network]]
== Pathways associated ==
+
* [[GSAAMINOTRANS-RXN]]
* [[SERSYN-PWY]]
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** 1 associated gene(s):
* [[PYRIDOXSYN-PWY]]
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*** [[Tiso_gene_8141]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[OHMETHYLBILANESYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11630]]
 +
*** [[Tiso_gene_14709]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PORPHOBILSYNTH-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_13382]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[UROGENIIISYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11630]]
 +
*** [[Tiso_gene_18827]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
{{#set: left end position=25}}
+
* ECOCYC:
{{#set: transcription direction=NEGATIVE}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-5188 PWY-5188]
{{#set: right end position=1724}}
+
{{#set: taxonomic range=TAX-33682}}
{{#set: centisome position=0.51282054    }}
+
{{#set: taxonomic range=TAX-1117}}
{{#set: reaction associated=PGLYCDEHYDROG-RXN|PSERTRANSAM-RXN|PSERTRANSAMPYR-RXN}}
+
{{#set: taxonomic range=TAX-1224}}
{{#set: pathway associated=SERSYN-PWY|PYRIDOXSYN-PWY}}
+
{{#set: taxonomic range=TAX-2157}}
 +
{{#set: taxonomic range=TAX-3398}}
 +
{{#set: common name=tetrapyrrole biosynthesis I (from glutamate)}}
 +
{{#set: reaction found=6}}
 +
{{#set: total reaction=6}}
 +
{{#set: completion rate=100.0}}

Latest revision as of 19:38, 21 March 2018

Pathway PWY-5188

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links