Difference between revisions of "RXN-14223"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARDP ARDP] == * direction: ** LEFT-TO-RIGHT * common name: ** ADP-ribose diphosphatase * Synonym(s)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] == * direction: ** REVERSIBLE * common name: ** ORF ** at1g17160 ** ribokinase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARDP ARDP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14223 RXN-14223] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ADP-ribose diphosphatase
+
** ORF
 +
** at1g17160
 +
** ribokinase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.1.15 EC-2.7.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ADENOSINE_DIPHOSPHATE_RIBOSE]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[AMP]][c] '''+''' 1.0 [[CPD-15318]][c] '''+''' 2.0 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[2-DEOXYRIBOSE]][c] '''<=>''' 1 [[DEOXY-RIBOSE-5P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ADP-D-ribose[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 AMP[c] '''+''' 1.0 &alpha;-D-ribose 5-phosphate[c] '''+''' 2.0 H+[c]
+
** 1 ATP[c] '''+''' 1 2'-deoxyribose[c] '''<=>''' 1 2-deoxy-D-ribose 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9180]]
+
* Gene: [[Tiso_gene_911]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_2747]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_17974]]
−
* [[Tiso_gene_2918]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_81]]
−
* [[Tiso_gene_7189]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18204]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_82]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_7682]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=ADP-ribose diphosphatase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30874 30874]
−
{{#set: gene associated=Tiso_gene_9180|Tiso_gene_2747|Tiso_gene_2918|Tiso_gene_7189}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02750 R02750]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=at1g17160}}
 +
{{#set: common name=ribokinase}}
 +
{{#set: ec number=EC-2.7.1.15}}
 +
{{#set: gene associated=Tiso_gene_911|Tiso_gene_17974|Tiso_gene_81|Tiso_gene_18204|Tiso_gene_82|Tiso_gene_7682}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-14223

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • at1g17160
    • ribokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 2'-deoxyribose[c] <=> 1 2-deoxy-D-ribose 5-phosphate[c] + 1 H+[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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