Difference between revisions of "R524-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_12020 == * right end position: ** 5829 * transcription direction: ** POSITIVE * left end position: ** 5419 * centisome position: ** 73.5977...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec number...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** cyanate_hydratase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| − | + | ** 1 [[PROTON]][c] '''+''' 1 [[CPD-69]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CARBAMATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] | |
| − | * | + | * With common name(s): |
| − | ** | + | ** 1 H+[c] '''+''' 1 cyanate[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carbamate[c] '''+''' 1 CO2[c] |
| − | * | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_15128]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** Source: [[orthology- | + | ** Source: [[annotation-experimental_annotation]] |
| − | * | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | ** Source: [[orthology-athaliana]] | ||
| + | == Pathways == | ||
| + | * [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ** Source: [[annotation-experimental_annotation]] | |
| − | + | *** Tool: [[pathwaytools]] | |
| − | * | + | |
| − | * [[ | + | |
| − | * [[ | + | |
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18489 18489] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P00816 P00816] |
| + | ** [http://www.uniprot.org/uniprot/Q55367 Q55367] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=cyanate_hydratase}} | ||
| + | {{#set: ec number=EC-4.2.1.104}} | ||
| + | {{#set: gene associated=Tiso_gene_15128}} | ||
| + | {{#set: in pathway=CYANCAT-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:11, 21 March 2018
Contents
Reaction R524-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- cyanate_hydratase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 CPD-69[c] + 1 HCO3[c] => 1 CARBAMATE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 cyanate[c] + 1 hydrogencarbonate[c] => 1 carbamate[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_15128
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: orthology-athaliana
- Source: annotation-in-silico_annotation
Pathways
- CYANCAT-PWY, cyanate degradation: CYANCAT-PWY
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
