Difference between revisions of "PWY-6892"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] == * smiles: ** C(C([O-])=O)=CC(=O)[O-] * inchi key: ** InChIKey=VZCYOOQTPOCHFL-OWOJBT...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] ==
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* smiles:
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* taxonomic range:
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** C(C([O-])=O)=CC(=O)[O-]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* inchi key:
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** InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
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* common name:
 
* common name:
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** fumarate
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** thiazole biosynthesis I (facultative anaerobic bacteria)
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* molecular weight:
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** 114.057   
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* Synonym(s):
 
* Synonym(s):
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** fum
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** (R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis
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** fumaric acid
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN-9929]]
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'''3''' reactions found over '''7''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[DXS-RXN]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 1 associated gene(s):
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* [[FUMARYLACETOACETASE-RXN]]
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*** [[Tiso_gene_17311]]
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* [[FAA]]
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** 7 reconstruction source(s) associated:
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* [[AAL_fum]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-22]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) of unknown directionality ==
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*** [[annotation-in-silico_annotation]]
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* [[FUMARATE-REDUCTASE-NADH-RXN]]
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*** [[orthology-athaliana]]
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* [[AMPSYN-RXN]]
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*** [[orthology-synechocystis]]
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* [[AICARSYN-RXN]]
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*** [[manual-primary_network]]
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* [[AIAL]]
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*** [[orthology-creinhardtii]]
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* [[ARGSUCCINLYA-RXN]]
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* [[RXN-14382]]
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* [[FUMHYDR-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14710]]
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*** [[Tiso_gene_11478]]
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*** [[Tiso_gene_4284]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN0-308]]
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** 3 associated gene(s):
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*** [[Tiso_gene_4284]]
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*** [[Tiso_gene_11478]]
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*** [[Tiso_gene_14710]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11319 RXN-11319]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9788 RXN-9788]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9789 RXN-9789]
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* [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN2-RXN THIAZOLSYN2-RXN]
 
== External links  ==
 
== External links  ==
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* CAS : 110-17-8
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* ECOCYC:
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* METABOLIGHTS : MTBLC29806
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6892 PWY-6892]
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* DRUGBANK : DB01677
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{{#set: taxonomic range=TAX-2}}
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* PUBCHEM:
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{{#set: common name=thiazole biosynthesis I (facultative anaerobic bacteria)}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460307 5460307]
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{{#set: common name=(R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis}}
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* KNAPSACK : C00001183
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{{#set: reaction found=3}}
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* HMDB : HMDB00134
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{{#set: total reaction=7}}
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* LIGAND-CPD:
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{{#set: completion rate=43.0}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00122 C00122]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4573886.html 4573886]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29806 29806]
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* BIGG : fum
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{{#set: smiles=C(C([O-])=O)=CC(=O)[O-]}}
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{{#set: inchi key=InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L}}
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{{#set: common name=fumarate}}
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{{#set: molecular weight=114.057    }}
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{{#set: common name=fum|fumaric acid}}
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{{#set: consumed by=RXN-9929}}
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{{#set: produced by=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN|FUMARYLACETOACETASE-RXN|FAA|AAL_fum|RXN-22}}
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{{#set: consumed or produced by=FUMARATE-REDUCTASE-NADH-RXN|AMPSYN-RXN|AICARSYN-RXN|AIAL|ARGSUCCINLYA-RXN|FUMHYDR-RXN}}
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Latest revision as of 19:42, 21 March 2018

Pathway PWY-6892

  • taxonomic range:
  • common name:
    • thiazole biosynthesis I (facultative anaerobic bacteria)
  • Synonym(s):
    • (R,Z)-2-(2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate biosynthesis

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6892&oldid=43286"