Difference between revisions of "RXN-14278"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] == * direction: ** LEFT-TO-RIGHT * common name: ** dimethylglycine_dehydrogena...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14278 RXN-14278] == * direction: ** REVERSIBLE * common name: ** hexanoyl-CoA dehydrogenase **...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-576 RXN66-576] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14278 RXN-14278] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** dimethylglycine_dehydrogenase
+
** hexanoyl-CoA dehydrogenase
 +
** acyl-_dehydrogenase
 +
** acyl-coenzyme_a_oxidase
 +
** ORF
 +
** acyl-CoA_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.5.8 EC-1.5.8]
+
** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 2 [[ETF-Oxidized]][c] '''+''' 3 [[PROTON]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 2 [[ETF-Reduced]][c] '''+''' 1 [[SARCOSINE]][c]
+
** 1 [[HEXANOYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD0-2121]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dimethylglycine[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 2 an oxidized electron-transfer flavoprotein[c] '''+''' 3 H+[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 2 a reduced electron-transfer flavoprotein[c] '''+''' 1 sarcosine[c]
+
** 1 hexanoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 trans-hex-2-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2717]]
+
* Gene: [[Tiso_gene_6475]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_14511]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_883]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17967]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16631]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18566]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5991]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8272]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-3661-1]], glycine betaine degradation II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3661-1 PWY-3661-1]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=dimethylglycine_dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31208 31208]
−
{{#set: ec number=EC-1.5.8}}
+
* LIGAND-RXN:
−
{{#set: gene associated=Tiso_gene_2717}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04751 R04751]
−
{{#set: in pathway=PWY-3661-1}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=hexanoyl-CoA dehydrogenase}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=acyl-CoA_dehydrogenase}}
 +
{{#set: ec number=EC-1.3.8.7}}
 +
{{#set: gene associated=Tiso_gene_6475|Tiso_gene_14511|Tiso_gene_883|Tiso_gene_17967|Tiso_gene_16631|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_8272}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:43, 21 March 2018

Reaction RXN-14278

  • direction:
    • REVERSIBLE
  • common name:
    • hexanoyl-CoA dehydrogenase
    • acyl-_dehydrogenase
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hexanoyl-CoA[c] + 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] <=> 1 a reduced electron-transfer flavoprotein[c] + 1 trans-hex-2-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14278&oldid=43451"