Difference between revisions of "PWY-6318"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10821 RXN-10821] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10821 RXN-10821] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.3.1.192 EC-2.3.1.192]
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** L-phenylalanine degradation IV (mammalian, via side chain)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''9''' reactions in the full pathway
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** 1 [[CPD-207]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11715]][c] '''+''' 1 [[CO-A]][c]
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* [[PHENDEHYD-RXN]]
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* With common name(s):
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** 0 associated gene:
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** 1 phenylacetyl-CoA[c] '''+''' 1 glycine[c] '''=>''' 1 H+[c] '''+''' 1 phenylacetylglycine[c] '''+''' 1 coenzyme A[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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* [[RXN-10814]]
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Genes have been associated with this reaction based on different elements listed below.
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** 6 associated gene(s):
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* [[Tiso_gene_7195]]
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*** [[Tiso_gene_12889]]
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** [[pantograph]]-[[athaliana]]
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*** [[Tiso_gene_15680]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_13538]]
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== Pathways  ==
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*** [[Tiso_gene_17809]]
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* [[PWY-6318]], L-phenylalanine degradation IV (mammalian, via side chain): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6318 PWY-6318]
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*** [[Tiso_gene_6815]]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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*** [[Tiso_gene_17718]]
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== Reconstruction information  ==
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** 4 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[annotation-experimental_annotation]]
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** [[pantograph]]:
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*** [[manual-primary_network]]
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*** [[esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[athaliana]]
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*** [[orthology-esiliculosus]]
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* [[RXN-10815]]
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** 3 associated gene(s):
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*** [[Tiso_gene_18328]]
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*** [[Tiso_gene_18976]]
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*** [[Tiso_gene_18977]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[RXN-10821]]
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** 1 associated gene(s):
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*** [[Tiso_gene_7195]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE-DECARBOXYLASE-RXN PHENYLALANINE-DECARBOXYLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10816 RXN-10816]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10817 RXN-10817]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10819 RXN-10819]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-MAP:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27850 27850]
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** [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05841 R05841]
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{{#set: common name=L-phenylalanine degradation IV (mammalian, via side chain)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=4}}
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{{#set: ec number=EC-2.3.1.192}}
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{{#set: total reaction=9}}
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{{#set: gene associated=Tiso_gene_7195}}
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{{#set: completion rate=44.0}}
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{{#set: in pathway=PWY-6318}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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Latest revision as of 19:46, 21 March 2018

Pathway PWY-6318

  • taxonomic range:
  • common name:
    • L-phenylalanine degradation IV (mammalian, via side chain)
  • Synonym(s):

Reaction(s) found

4 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6318&oldid=43699"