Difference between revisions of "RXN-13037"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8899 RXN-8899] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13037 RXN-13037] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl:GcvH transferase *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8899 RXN-8899] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13037 RXN-13037] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** octanoyl:GcvH transferase
 +
** lipoate-protein_ligase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.181 EC-2.3.1.181]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[2-AMINOACRYLATE]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[Gcv-H]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[Octanoylated-Gcv-H]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 2-aminoprop-2-enoate[c] '''=>''' 1 pyruvate[c] '''+''' 1 ammonium[c]
+
** 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 H+[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4494]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_4493]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7614]], methiin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7614 PWY-7614]
+
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5707]], propanethial S-oxide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5707 PWY-5707]
+
* [[PWY-7382]], lipoate biosynthesis and incorporation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7382 PWY-7382]
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5706]], alliin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5706 PWY-5706]
+
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5708]], ethiin metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5708 PWY-5708]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6539]], (Z)-phenylmethanethial S-oxide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6539 PWY-6539]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08698 R08698]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=PWY-7614|PWY-5707|PWY-5706|PWY-5708|PWY-6539}}
+
{{#set: common name=octanoyl:GcvH transferase}}
 +
{{#set: common name=lipoate-protein_ligase}}
 +
{{#set: ec number=EC-2.3.1.181}}
 +
{{#set: gene associated=Tiso_gene_4494|Tiso_gene_4493}}
 +
{{#set: in pathway=PWY-6987|PWY-7382}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 19:50, 21 March 2018

Reaction RXN-13037

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • octanoyl:GcvH transferase
    • lipoate-protein_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] + 1 an octanoyl-[acp][c] => 1 H+[c] + 1 a holo-[acyl-carrier protein][c] + 1 a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus): PWY-6987
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7382, lipoate biosynthesis and incorporation (yeast): PWY-7382
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13037&oldid=44097"