Difference between revisions of "RXN-10777"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diacylglycero...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIACYLGLYKIN-RXN DIACYLGLYKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10777 RXN-10777] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** diacylglycerol_kinase_catalytic_region
 
−
** diacylglycerol_kinase
 
−
** sphingosine_kinase_1
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.107 EC-2.7.1.107]
+
** [http://enzyme.expasy.org/EC/2.8.2.1 EC-2.8.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[PAPS]][c] '''+''' 1 [[SEROTONIN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11665]][c] '''+''' 1 [[3-5-ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 ATP[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 3'-phosphoadenylyl-sulfate[c] '''+''' 1 serotonin[c] '''=>''' 1 H+[c] '''+''' 1 serotonin O-sulfate[c] '''+''' 1 adenosine 3',5'-bisphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1163]]
+
* Gene: [[Tiso_gene_5505]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_1420]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14560]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
+
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
−
** '''7''' reactions found over '''16''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7039]], phosphatidate metabolism, as a signaling molecule: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7039 PWY-7039]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10272 10272]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02240 R02240]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q01583 Q01583]
 
−
** [http://www.uniprot.org/uniprot/P49621 P49621]
 
−
** [http://www.uniprot.org/uniprot/P49619 P49619]
 
−
** [http://www.uniprot.org/uniprot/P51556 P51556]
 
−
** [http://www.uniprot.org/uniprot/Q9JTJ7 Q9JTJ7]
 
−
** [http://www.uniprot.org/uniprot/Q9CGK9 Q9CGK9]
 
−
** [http://www.uniprot.org/uniprot/Q9PIN8 Q9PIN8]
 
−
** [http://www.uniprot.org/uniprot/O08560 O08560]
 
−
** [http://www.uniprot.org/uniprot/P0ABN1 P0ABN1]
 
−
** [http://www.uniprot.org/uniprot/P20192 P20192]
 
−
** [http://www.uniprot.org/uniprot/P23743 P23743]
 
−
** [http://www.uniprot.org/uniprot/Q06119 Q06119]
 
−
** [http://www.uniprot.org/uniprot/Q03603 Q03603]
 
−
** [http://www.uniprot.org/uniprot/Q39017 Q39017]
 
−
** [http://www.uniprot.org/uniprot/Q09103 Q09103]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=diacylglycerol_kinase_catalytic_region}}
+
{{#set: ec number=EC-2.8.2.1}}
−
{{#set: common name=diacylglycerol_kinase}}
+
{{#set: gene associated=Tiso_gene_5505}}
−
{{#set: common name=sphingosine_kinase_1}}
+
{{#set: in pathway=PWY-6313}}
−
{{#set: ec number=EC-2.7.1.107}}
+
−
{{#set: gene associated=Tiso_gene_1163|Tiso_gene_1420|Tiso_gene_14560}}
+
−
{{#set: in pathway=PWY-7817|PWY-7039}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 19:09, 21 March 2018

Reaction RXN-10777

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3'-phosphoadenylyl-sulfate[c] + 1 serotonin[c] => 1 H+[c] + 1 serotonin O-sulfate[c] + 1 adenosine 3',5'-bisphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10777&oldid=39799"