Difference between revisions of "PWY-6689"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6689 PWY-6689] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
−
** cryptochrome_photolyase_fad-binding_domain-containing_protein
+
** tRNA splicing I
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''7''' reactions in the full pathway
−
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
+
* [[2.7.1.160-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
**
+
*** [[Tiso_gene_17372]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-experimental_annotation]]
−
* [[Tiso_gene_15524]]
+
* [[3.1.27.9-RXN]]
−
** [[pantograph]]-[[esiliculosus]]
+
** 3 associated gene(s):
−
* [[Tiso_gene_15525]]
+
*** [[Tiso_gene_3776]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_10338]]
−
* [[Tiso_gene_6548]]
+
*** [[Tiso_gene_5254]]
−
** IN-SILICO_ANNOTATION
+
** 1 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_16321]]
+
== Reaction(s) not found ==
−
** [[pantograph]]-[[esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10034 RXN-10034]
−
* [[Tiso_gene_15196]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12055 RXN-12055]
−
** [[pantograph]]-[[esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17939 RXN-17939]
−
* [[Tiso_gene_6547]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17940 RXN-17940]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17941 RXN-17941]
−
***EC-NUMBER
+
−
* [[Tiso_gene_6546]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33090}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
+
{{#set: taxonomic range=TAX-4751}}
−
* UNIPROT:
+
{{#set: common name=tRNA splicing I}}
−
** [http://www.uniprot.org/uniprot/P12769 P12769]
+
{{#set: reaction found=2}}
−
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
+
{{#set: total reaction=7}}
−
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
+
{{#set: completion rate=29.0}}
−
** [http://www.uniprot.org/uniprot/P12768 P12768]
+
−
** [http://www.uniprot.org/uniprot/P27526 P27526]
+
−
** [http://www.uniprot.org/uniprot/P25078 P25078]
+
−
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
+
−
** [http://www.uniprot.org/uniprot/P40115 P40115]
+
−
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
+
−
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
+
−
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
+
−
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
+
−
** [http://www.uniprot.org/uniprot/P05066 P05066]
+
−
** [http://www.uniprot.org/uniprot/O24020 O24020]
+
−
** [http://www.uniprot.org/uniprot/O24374 O24374]
+
−
** [http://www.uniprot.org/uniprot/P00914 P00914]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=cryptochrome_photolyase_fad-binding_domain-containing_protein}}
+
−
{{#set: ec number=EC-4.1.99.3}}
+
−
{{#set: gene associated=Tiso_gene_15524|Tiso_gene_15525|Tiso_gene_6548|Tiso_gene_16321|Tiso_gene_15196|Tiso_gene_6547|Tiso_gene_6546}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:09, 21 March 2018

Pathway PWY-6689

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6689&oldid=39833"