Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=16-HYDROXYPALMITATE 16-HYDROXYPALMITATE] == * smiles: ** C(CCCCCCCCCCCCCCC([O-])=O)O * inchi ke...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] == * direction: ** LEF...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=16-HYDROXYPALMITATE 16-HYDROXYPALMITATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] ==
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* smiles:
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* direction:
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** C(CCCCCCCCCCCCCCC([O-])=O)O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UGAGPNKCDRTDHP-UHFFFAOYSA-M
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* common name:
 
* common name:
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** 16-hydroxypalmitate
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** magnesium-protoporphyrin_o-methyltransferase
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* molecular weight:
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* ec number:
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** 271.419   
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** [http://enzyme.expasy.org/EC/2.1.1.11 EC-2.1.1.11]
 
* Synonym(s):
 
* Synonym(s):
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** 16-hydroxy-hexadecanoate
 
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** ω-hydroxy-hexadecanoate
 
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** ω-hydroxy-palmitate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16389]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MG-PROTOPORPHYRIN-MONOMETHYL-ESTER]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 Mg-protoporphyrin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 magnesium-protoporphyrin IX 13-monomethyl ester[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19451]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058075 7058075]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17809 17809]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.5414440.html 5414440]
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** [http://www.genome.jp/dbget-bin/www_bget?R04237 R04237]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=55329 55329]
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** [http://www.uniprot.org/uniprot/P26162 P26162]
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* HMDB : HMDB06294
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** [http://www.uniprot.org/uniprot/Q9RFD7 Q9RFD7]
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{{#set: smiles=C(CCCCCCCCCCCCCCC([O-])=O)O}}
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** [http://www.uniprot.org/uniprot/Q9RFD5 Q9RFD5]
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{{#set: inchi key=InChIKey=UGAGPNKCDRTDHP-UHFFFAOYSA-M}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=16-hydroxypalmitate}}
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{{#set: common name=magnesium-protoporphyrin_o-methyltransferase}}
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{{#set: molecular weight=271.419    }}
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{{#set: ec number=EC-2.1.1.11}}
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{{#set: common name=16-hydroxy-hexadecanoate|ω-hydroxy-hexadecanoate|ω-hydroxy-palmitate}}
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{{#set: gene associated=Tiso_gene_19451}}
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{{#set: consumed by=RXN-16389}}
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{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:06, 21 March 2018

Reaction RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • magnesium-protoporphyrin_o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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