Difference between revisions of "1.5.1.7-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.23 EC-4.1.1.23]
+
** [http://enzyme.expasy.org/EC/1.5.1.7 EC-1.5.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[OROTIDINE-5-PHOSPHATE]][c] '''=>''' 1 [[UMP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SACCHAROPINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LYS]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 orotidine 5'-phosphate[c] '''=>''' 1 UMP[c] '''+''' 1 CO2[c]
+
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 L-saccharopine[c] '''=>''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 L-lysine[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_20050]]
+
* Gene: [[Tiso_gene_1156]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[orthology-athaliana]]
−
* [[Tiso_gene_18647]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
+
* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[synechocystis]]
+
*** Tool: [[pantograph]]
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12440 12440]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00715 R00715]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P11172 P11172]
+
** [http://www.uniprot.org/uniprot/P38997 P38997]
−
** [http://www.uniprot.org/uniprot/Q9KQT7 Q9KQT7]
+
** [http://www.uniprot.org/uniprot/P38998 P38998]
−
** [http://www.uniprot.org/uniprot/Q9CFW9 Q9CFW9]
+
−
** [http://www.uniprot.org/uniprot/P24220 P24220]
+
−
** [http://www.uniprot.org/uniprot/P0A5M7 P0A5M7]
+
−
** [http://www.uniprot.org/uniprot/P43812 P43812]
+
−
** [http://www.uniprot.org/uniprot/Q9PIC1 Q9PIC1]
+
−
** [http://www.uniprot.org/uniprot/P10652 P10652]
+
−
** [http://www.uniprot.org/uniprot/P07817 P07817]
+
−
** [http://www.uniprot.org/uniprot/P03962 P03962]
+
−
** [http://www.uniprot.org/uniprot/P14017 P14017]
+
−
** [http://www.uniprot.org/uniprot/P07691 P07691]
+
−
** [http://www.uniprot.org/uniprot/P08244 P08244]
+
−
** [http://www.uniprot.org/uniprot/P13439 P13439]
+
−
** [http://www.uniprot.org/uniprot/P05035 P05035]
+
−
** [http://www.uniprot.org/uniprot/P09463 P09463]
+
−
** [http://www.uniprot.org/uniprot/P14964 P14964]
+
−
** [http://www.uniprot.org/uniprot/P21593 P21593]
+
−
** [http://www.uniprot.org/uniprot/P15188 P15188]
+
−
** [http://www.uniprot.org/uniprot/P07922 P07922]
+
−
** [http://www.uniprot.org/uniprot/P0A5M6 P0A5M6]
+
−
** [http://www.uniprot.org/uniprot/Q9JV18 Q9JV18]
+
−
** [http://www.uniprot.org/uniprot/P25971 P25971]
+
−
** [http://www.uniprot.org/uniprot/P46535 P46535]
+
−
** [http://www.uniprot.org/uniprot/P31754 P31754]
+
−
** [http://www.uniprot.org/uniprot/P32430 P32430]
+
−
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
+
−
** [http://www.uniprot.org/uniprot/P09556 P09556]
+
−
** [http://www.uniprot.org/uniprot/P21594 P21594]
+
−
** [http://www.uniprot.org/uniprot/Q06375 Q06375]
+
−
** [http://www.uniprot.org/uniprot/P41769 P41769]
+
−
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
+
−
** [http://www.uniprot.org/uniprot/Q59654 Q59654]
+
−
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
+
−
** [http://www.uniprot.org/uniprot/P48844 P48844]
+
−
** [http://www.uniprot.org/uniprot/P43230 P43230]
+
−
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
+
−
** [http://www.uniprot.org/uniprot/O74110 O74110]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.1.23}}
+
{{#set: ec number=EC-1.5.1.7}}
−
{{#set: gene associated=Tiso_gene_20050|Tiso_gene_18647}}
+
{{#set: gene associated=Tiso_gene_1156}}
−
{{#set: in pathway=PWY-7790|PWY-7791|PWY-5686}}
+
{{#set: in pathway=LYSINE-AMINOAD-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction source=primary_network}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:08, 21 March 2018

Reaction 1.5.1.7-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 H2O[c] + 1 L-saccharopine[c] => 1 H+[c] + 1 2-oxoglutarate[c] + 1 L-lysine[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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