Difference between revisions of "RXN-8730"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8730 RXN-8730] == * direction: ** LEFT-TO-RIGHT * common name: ** inositol_polyphosphate_5phosp...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8730 RXN-8730] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxo-octanoyl-[acyl-carrier protein] synthase
+
** inositol_polyphosphate_5phosphatase
−
** 3-oxoacyl-synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
** [http://enzyme.expasy.org/EC/3.1.3.56 EC-3.1.3.56]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-506]][c] '''=>''' 1 [[INOSITOL-1-3-4-TRIPHOSPHATE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-octanoyl-[acp][c]
+
** 1 H2O[c] '''+''' 1 D-myo-inositol (1,3,4,5)-tetrakisphosphate[c] '''=>''' 1 D-myo-inositol (1,3,4)-trisphosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_14485]]
+
* Gene: [[Tiso_gene_6030]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_19302]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15991]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5939]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
* [[PWY-6364]], D-myo-inositol (1,3,4)-trisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6364 PWY-6364]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6362]], 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6362 PWY-6362]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
*** [[athaliana]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11392 11392]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03430 R03430]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] synthase}}
+
{{#set: common name=inositol_polyphosphate_5phosphatase}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: ec number=EC-3.1.3.56}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: gene associated=Tiso_gene_6030}}
−
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_15991|Tiso_gene_5939}}
+
{{#set: in pathway=PWY-6364|PWY-6362}}
−
{{#set: in pathway=PWY-5971}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:10, 21 March 2018

Reaction RXN-8730

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • inositol_polyphosphate_5phosphatase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 D-myo-inositol (1,3,4,5)-tetrakisphosphate[c] => 1 D-myo-inositol (1,3,4)-trisphosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6364, D-myo-inositol (1,3,4)-trisphosphate biosynthesis: PWY-6364
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6362, 1D-myo-inositol hexakisphosphate biosynthesis II (mammalian): PWY-6362
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8730&oldid=46491"