Difference between revisions of "THREONINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16557 RXN-16557] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16557 RXN-16557] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-coenzyme_a_oxidase
 
−
** acyl-_dehydrogenase
 
 
** ORF
 
** ORF
−
** acyl-CoA_dehydrogenase
+
** threonine--trna_ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
+
** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[CPD-16001]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[CPD-17813]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 (11Z)-hexadecenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 (2E,11Z)-hexadec-2,11-dienoyl-CoA[c]
+
** 1 ATP[c] '''+''' 1 L-threonine[c] '''+''' 1 a tRNAthr[c] '''=>''' 1 an L-threonyl-[tRNAthr][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18566]]
+
* Gene: [[Tiso_gene_13142]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6475]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_16631]]
+
* Gene: [[Tiso_gene_4406]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_883]]
+
** Source: [[annotation-experimental_annotation]]
−
** EXPERIMENTAL_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
−
* [[Tiso_gene_17967]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5991]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24624 24624]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O83809 O83809]
 +
** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
 +
** [http://www.uniprot.org/uniprot/P56071 P56071]
 +
** [http://www.uniprot.org/uniprot/O58430 O58430]
 +
** [http://www.uniprot.org/uniprot/P47615 P47615]
 +
** [http://www.uniprot.org/uniprot/O05947 O05947]
 +
** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
 +
** [http://www.uniprot.org/uniprot/O67583 O67583]
 +
** [http://www.uniprot.org/uniprot/O27504 O27504]
 +
** [http://www.uniprot.org/uniprot/O51662 O51662]
 +
** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
 +
** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
 +
** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
 +
** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
 +
** [http://www.uniprot.org/uniprot/P43014 P43014]
 +
** [http://www.uniprot.org/uniprot/P46244 P46244]
 +
** [http://www.uniprot.org/uniprot/P75225 P75225]
 +
** [http://www.uniprot.org/uniprot/Q48989 Q48989]
 +
** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
 +
** [http://www.uniprot.org/uniprot/O04630 O04630]
 +
** [http://www.uniprot.org/uniprot/P18255 P18255]
 +
** [http://www.uniprot.org/uniprot/P18256 P18256]
 +
** [http://www.uniprot.org/uniprot/P04801 P04801]
 +
** [http://www.uniprot.org/uniprot/P07236 P07236]
 +
** [http://www.uniprot.org/uniprot/P26639 P26639]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-coenzyme_a_oxidase}}
 
−
{{#set: common name=acyl-_dehydrogenase}}
 
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=acyl-CoA_dehydrogenase}}
+
{{#set: common name=threonine--trna_ligase}}
−
{{#set: ec number=EC-1.3.8.9}}
+
{{#set: ec number=EC-6.1.1.3}}
−
{{#set: gene associated=Tiso_gene_18566|Tiso_gene_6475|Tiso_gene_16631|Tiso_gene_883|Tiso_gene_17967|Tiso_gene_5991}}
+
{{#set: gene associated=Tiso_gene_13142|Tiso_gene_4406}}
−
{{#set: in pathway=PWY-7656}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:13, 21 March 2018

Reaction THREONINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • threonine--trna_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-threonine[c] + 1 a tRNAthr[c] => 1 an L-threonyl-[tRNAthr][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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