Difference between revisions of "RXN-9896"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** folylpolyglutamate_synthase
 
−
** bifunctional_protein
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[THF-GLU-N]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 a tetrahydrofolate[c] '''+''' 1 phosphate[c]
+
** 1 3-hydroxy-N6,N6,N6-trimethyl-L-lysine[c] '''=>''' 1 4-trimethylammoniobutanal[c] '''+''' 1 glycine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_92]]
+
* Gene: [[Tiso_gene_13940]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15942]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
+
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-esiliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04241 R04241]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P15925 P15925]
+
−
** [http://www.uniprot.org/uniprot/Q9JVC6 Q9JVC6]
+
−
** [http://www.uniprot.org/uniprot/P43775 P43775]
+
−
** [http://www.uniprot.org/uniprot/Q9PNK6 Q9PNK6]
+
−
** [http://www.uniprot.org/uniprot/Q9CGE0 Q9CGE0]
+
−
** [http://www.uniprot.org/uniprot/Q50990 Q50990]
+
−
** [http://www.uniprot.org/uniprot/P48760 P48760]
+
−
** [http://www.uniprot.org/uniprot/P08192 P08192]
+
−
** [http://www.uniprot.org/uniprot/O13492 O13492]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=folylpolyglutamate_synthase}}
+
{{#set: gene associated=Tiso_gene_13940}}
−
{{#set: common name=bifunctional_protein}}
+
{{#set: in pathway=PWY-6100}}
−
{{#set: ec number=EC-6.3.2.17}}
+
−
{{#set: gene associated=Tiso_gene_92|Tiso_gene_15942}}
+
−
{{#set: in pathway=PWY-2161}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 21:14, 21 March 2018

Reaction RXN-9896

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9896&oldid=47030"