Difference between revisions of "Tiso gene 6475"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCYLTRANSFERASE-RXN LEUCYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6475 == * right end position: ** 2698 * transcription direction: ** NEGATIVE * left end position: ** 550 * centisome position: ** 4.5111547...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCYLTRANSFERASE-RXN LEUCYLTRANSFERASE-RXN] ==
+
== Gene Tiso_gene_6475 ==
* direction:
+
* right end position:
** LEFT-TO-RIGHT
+
** 2698
* common name:
+
* transcription direction:
** ORF
+
** NEGATIVE
** leucyl_phenylalanyl-trna--protein
+
* left end position:
** leucyl_phenylalanyl-trna--protein_transferase
+
** 550
* ec number:
+
* centisome position:
** [http://enzyme.expasy.org/EC/2.3.2.6 EC-2.3.2.6]
+
** 4.5111547   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* Reaction: [[ACYLCOADEHYDROG-RXN]]
** 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[Protein-N-terminal-L-Lysine]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[LEU-tRNAs]][c] '''+''' 1 [[L-leucyl-L-lysyl-Protein]][c]
+
** Source: [[annotation-in-silico_annotation]]
* With common name(s):
+
*** Assignment: automated-name-match
** 1 an L-leucyl-[tRNAleu][c] '''+''' 1 an N-terminal L-lysyl-[protein][c] '''=>''' 1 H+[c] '''+''' 1 a tRNAleu[c] '''+''' 1 a [protein] N-terminal L-leucyl-L-lysine[c]
+
** Source: [[orthology-esiliculosus]]
 
+
* Reaction: [[LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN]]
== Genes associated with this reaction  ==
+
** Source: [[annotation-in-silico_annotation]]
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
* [[Tiso_gene_13698]]
+
* Reaction: [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
***EC-NUMBER
+
* Reaction: [[RXN-11734]]
* [[Tiso_gene_2584]]
+
** Source: [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
***EC-NUMBER
+
* Reaction: [[RXN-13451]]
* [[Tiso_gene_8540]]
+
** Source: [[annotation-in-silico_annotation]]
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
***EC-NUMBER
+
* Reaction: [[RXN-13615]]
== Pathways  ==
+
** Source: [[annotation-in-silico_annotation]]
* [[PWY-7801]], N-end rule pathway I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7801 PWY-7801]
+
*** Assignment: ec-number
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* Reaction: [[RXN-14131]]
== Reconstruction information  ==
+
** Source: [[annotation-in-silico_annotation]]
* [[annotation]]:
+
*** Assignment: ec-number
** [[pathwaytools]]:
+
* Reaction: [[RXN-14193]]
*** [[in-silico_annotation]]
+
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14229]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14262]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14264]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-14278]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-16540]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16557]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-17775]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17779]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17783]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17784]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17788]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17792]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-17796]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-7094]]
 +
* [[PWY-7654]]
 +
* [[FAO-PWY]]
 +
* [[PWY-7656]]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: right end position=2698}}
** [http://www.genome.jp/dbget-bin/www_bget?R03813 R03813]
+
{{#set: transcription direction=NEGATIVE}}
* UNIPROT:
+
{{#set: left end position=550}}
** [http://www.uniprot.org/uniprot/P73571 P73571]
+
{{#set: centisome position=4.5111547    }}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=ACYLCOADEHYDROG-RXN|LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|RXN-11734|RXN-13451|RXN-13615|RXN-14131|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-16540|RXN-16557|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
{{#set: common name=ORF}}
+
{{#set: pathway associated=PWY-7094|PWY-7654|FAO-PWY|PWY-7656}}
{{#set: common name=leucyl_phenylalanyl-trna--protein}}
+
{{#set: common name=leucyl_phenylalanyl-trna--protein_transferase}}
+
{{#set: ec number=EC-2.3.2.6}}
+
{{#set: gene associated=Tiso_gene_13698|Tiso_gene_2584|Tiso_gene_8540}}
+
{{#set: in pathway=PWY-7801}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_6475

  • right end position:
    • 2698
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 550
  • centisome position:
    • 4.5111547
  • Synonym(s):

Reactions associated

Pathways associated

External links