Difference between revisions of "Tiso gene 16153"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-353 RXN66-353] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-beta_hydroxysteroid_dehyd...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16153 == * right end position: ** 4458 * transcription direction: ** POSITIVE * left end position: ** 536 * centisome position: ** 11.78281...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-353 RXN66-353] ==
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== Gene Tiso_gene_16153 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4458
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* common name:
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* transcription direction:
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** 3-beta_hydroxysteroid_dehydrogenase_isomerase
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** POSITIVE
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** ORF
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* left end position:
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* ec number:
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** 536
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** [http://enzyme.expasy.org/EC/1.1.1.145 EC-1.1.1.145]
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* centisome position:
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** 11.782810   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYOHMETRANS-RXN]]
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** 1 [[PREGNENOLONE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD66-28]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 pregnenolone[c] '''+''' 1 NAD+[c] '''=>''' 1 pregn-5-ene-3,20-dione[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN0-5234]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_11016]]
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*** Assignment: automated-name-match
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-2161]]
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* [[Tiso_gene_2957]]
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* [[PWY-1622]]
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** IN-SILICO_ANNOTATION
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* [[PWY-3841]]
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***EC-NUMBER
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* [[1CMET2-PWY]]
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* [[Tiso_gene_18774]]
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* [[PWY-3661]]
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** IN-SILICO_ANNOTATION
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* [[GLYSYN-PWY]]
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***EC-NUMBER
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* [[PWY-5497]]
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* [[Tiso_gene_897]]
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* [[PWY-2201]]
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** IN-SILICO_ANNOTATION
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* [[PWY-181]]
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***EC-NUMBER
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* [[PWY-3661-1]]
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== Pathways ==
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* [[PWY-7299]], progesterone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7299 PWY-7299]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4458}}
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{{#set: common name=3-beta_hydroxysteroid_dehydrogenase_isomerase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=536}}
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{{#set: ec number=EC-1.1.1.145}}
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{{#set: centisome position=11.782810    }}
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{{#set: gene associated=Tiso_gene_11016|Tiso_gene_2957|Tiso_gene_18774|Tiso_gene_897}}
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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{{#set: in pathway=PWY-7299}}
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:19, 21 March 2018

Gene Tiso_gene_16153

  • right end position:
    • 4458
  • transcription direction:
    • POSITIVE
  • left end position:
    • 536
  • centisome position:
    • 11.782810
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16153&oldid=47808"