Difference between revisions of "RXN-5424"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-31...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] == * direction: ** LEFT-TO-RIGHT * common name: ** indole-3-glycol dehydrogenase...") |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5424 RXN-5424] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** indole-3-glycol dehydrogenase |
| + | ** polyketide_synthase | ||
| + | ** ORF | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1] | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction | + | == Reaction Formula == |
| − | * '''1''' | + | * With identifiers: |
| − | + | ** 1 [[PROTON]][c] '''+''' 1 [[3-INDOLYLGLYCOLALDEHYDE]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[INDOLE-3-GLYCOL]][c] '''+''' 1 [[NAD]][c] | |
| − | + | * With common name(s): | |
| − | * ''' | + | ** 1 H+[c] '''+''' 1 indole-3-glycol aldehyde[c] '''+''' 1 NADH[c] '''=>''' 1 indole-3-glycol[c] '''+''' 1 NAD+[c] |
| − | ** [ | + | |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object= | + | == Genes associated with this reaction == |
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_6562]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_6563]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_7649]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5424]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_5425]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | * [[PWY-3162]], L-tryptophan degradation V (side chain pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3162 PWY-3162] | ||
| + | ** '''2''' reactions found over '''13''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=indole-3-glycol dehydrogenase}} |
| − | {{#set: | + | {{#set: common name=polyketide_synthase}} |
| − | {{#set: common name= | + | {{#set: common name=ORF}} |
| − | {{#set: | + | {{#set: ec number=EC-1.1.1.1}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_6562|Tiso_gene_6563|Tiso_gene_7649|Tiso_gene_5424|Tiso_gene_5425}} |
| + | {{#set: in pathway=PWY-3162}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:12, 21 March 2018
Contents
Reaction RXN-5424
- direction:
- LEFT-TO-RIGHT
- common name:
- indole-3-glycol dehydrogenase
- polyketide_synthase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 3-INDOLYLGLYCOLALDEHYDE[c] + 1 NADH[c] => 1 INDOLE-3-GLYCOL[c] + 1 NAD[c]
- With common name(s):
- 1 H+[c] + 1 indole-3-glycol aldehyde[c] + 1 NADH[c] => 1 indole-3-glycol[c] + 1 NAD+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6562
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_6563
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7649
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5424
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_5425
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
- PWY-3162, L-tryptophan degradation V (side chain pathway): PWY-3162
- 2 reactions found over 13 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
