Difference between revisions of "RXN-14390"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7607 RXN-7607] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_-nucleotidase ** 5_deoxy_cy...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14390 RXN-14390] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7607 RXN-7607] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14390 RXN-14390] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** 5_-nucleotidase
 
** 5_deoxy_cytosolic_type_c_protein
 
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
 
** ORF
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.1.3.99 EC-3.1.3.99]
 
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c]
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** 1 [[Apo-FeS-cluster-proteins]][c] '''+''' 1 [[Chap-ATP-Co-chaperone-SP-2Fe2S-Complex]][c] '''=>''' 1 [[Chap-ADP-apo-SP-Complex]][c] '''+''' 1 [[FeS-Cluster-Co-Chaperones]][c] '''+''' 1 [[2Fe-2S-proteins]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 IMP[c] '''+''' 1 H2O[c] '''=>''' 1 inosine[c] '''+''' 1 phosphate[c]
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** 1 an apo-iron-sulfur protein[c] '''+''' 1 a [chaperone-ATP]-[co-chaperone]-[scaffold protein-(2Fe-2S)] complex[c] '''=>''' 1 a [chaperone-ADP]-[disordered-form scaffold protein] complex[c] '''+''' 1 an [Fe-S cluster biosynthesis co-chaperone][c] '''+''' 1 an [2Fe-2S] cluster protein[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Tiso_gene_14246]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_14435]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_14434]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
* [[Tiso_gene_5911]]
 
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
* [[Tiso_gene_6640]]
 
** [[pantograph]]-[[esiliculosus]]
 
* [[Tiso_gene_6988]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
* [[Tiso_gene_13929]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** [[pantograph]]-[[esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
** '''8''' reactions found over '''8''' reactions in the full pathway
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
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** Source: [[annotation-experimental_annotation]]
*** [[esiliculosus]]
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*** Tool: [[pathwaytools]]
* [[annotation]]:
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** Source: [[annotation-in-silico_annotation]]
** [[pathwaytools]]:
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*** Tool: [[pathwaytools]]
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27718 27718]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01126 R01126]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=5_-nucleotidase}}
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{{#set: in pathway=PWY-7250}}
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
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{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.3.99}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Tiso_gene_14246|Tiso_gene_14435|Tiso_gene_14434|Tiso_gene_5911|Tiso_gene_6640|Tiso_gene_6988|Tiso_gene_13929}}
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{{#set: in pathway=PWY-6596}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:21, 21 March 2018

Reaction RXN-14390

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links