Difference between revisions of "MCDH 2mb2coa"

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(Created page with "Category:Gene == Gene Tiso_gene_19480 == * left end position: ** 87 * transcription direction: ** POSITIVE * right end position: ** 2116 * centisome position: ** 3.8007863...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methylacyl-coa dehy...")
 
(4 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_19480 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH_2mb2coa MCDH_2mb2coa] ==
* left end position:
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* direction:
** 87
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** 2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming
* right end position:
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** 2116
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* centisome position:
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** 3.8007863   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[G6PI]]
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* With identifiers:
** [[pantograph]]-[[creinhardtii]]
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** 1.0 [[2-METHYL-BUTYRYL-COA]][m] '''+''' 1.0 [[FAD]][m] '''=>''' 1.0 [[FADH2]][m] '''+''' 1.0 [[CPD-1083]][m]
* [[GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN]]
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* With common name(s):
** [[pantograph]]-[[creinhardtii]]
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** 1.0 2-methylbutanoyl-CoA[m] '''+''' 1.0 FAD[m] '''=>''' 1.0 FADH2[m] '''+''' 1.0 (E)-2-methylcrotonoyl-CoA[m]
* [[PGIA]]
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** [[pantograph]]-[[creinhardtii]]
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== Genes associated with this reaction  ==
* [[PGIAh]]
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Genes have been associated with this reaction based on different elements listed below.
** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_10643]]
* [[PGIB]]
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** Source: [[orthology-creinhardtii]]
** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_16113]]
* [[PGIBh]]
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** Source: [[orthology-creinhardtii]]
** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
* [[PGLUCISOM-RXN]]
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== Reconstruction information  ==
** in-silico_annotation
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* Category: [[orthology]]
***ec-number
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** Source: [[orthology-creinhardtii]]
** experimental_annotation
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*** Tool: [[pantograph]]
***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[R00771]]
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** [[pantograph]]-[[synechocystis]]
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* [[RXN-13720]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-6182]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[RUMP-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-3801]]
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* [[PWY-7385]]
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* [[P124-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5659]]
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* [[PWY-6981]]
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* [[P341-PWY]]
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* [[PWY-5384]]
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* [[PWY-7347]]
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* [[PWY66-399]]
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* [[SUCSYN-PWY]]
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* [[UDPNAGSYN-PWY]]
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* [[PWY-621]]
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* [[PWY-622]]
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* [[PWY-5054]]
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* [[PWY-6992]]
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* [[PWY-6142]]
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* [[GLUCONEO-PWY]]
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* [[PWY-7238]]
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* [[PWY-5514]]
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* [[P122-PWY]]
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== External links  ==
 
== External links  ==
{{#set: left end position=87}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming}}
{{#set: right end position=2116}}
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{{#set: gene associated=Tiso_gene_10643|Tiso_gene_16113}}
{{#set: centisome position=3.8007863    }}
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{{#set: in pathway=}}
{{#set: reaction associated=G6PI|GLUCOSE-6-PHOSPHATE-1-EPIMERASE-RXN|PGIA|PGIAh|PGIB|PGIBh|PGLUCISOM-RXN|R00771|RXN-13720|RXN-6182}}
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{{#set: reconstruction category=orthology}}
{{#set: pathway associated=RUMP-PWY|GLYCOLYSIS|PWY-3801|PWY-7385|P124-PWY|ANAGLYCOLYSIS-PWY|PWY-5659|PWY-6981|P341-PWY|PWY-5384|PWY-7347|PWY66-399|SUCSYN-PWY|UDPNAGSYN-PWY|PWY-621|PWY-622|PWY-5054|PWY-6992|PWY-6142|GLUCONEO-PWY|PWY-7238|PWY-5514|P122-PWY}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:22, 21 March 2018

Reaction MCDH_2mb2coa

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-methylacyl-coa dehydrogenase, trans-2-Methylbut-2-enoyl-CoA forming
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-methylbutanoyl-CoA[m] + 1.0 FAD[m] => 1.0 FADH2[m] + 1.0 (E)-2-methylcrotonoyl-CoA[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links