Difference between revisions of "RXN-14280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannonate...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14280 RXN-14280] == * direction: ** REVERSIBLE * common name: ** perillyl aldehyde dehydrogenas...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14280 RXN-14280] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** mannonate_dehydratase
+
** perillyl aldehyde dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.8 EC-4.2.1.8]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-MANNONATE]][c] '''=>''' 1 [[2-DEHYDRO-3-DEOXY-D-GLUCONATE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-1084]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CPD-12443]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-mannonate[c] '''=>''' 1 2-dehydro-3-deoxy-D-gluconate[c] '''+''' 1 H2O[c]
+
** 1 NAD+[c] '''+''' 1 perillyl aldehyde[c] '''+''' 1 H2O[c] '''<=>''' 1 perillate[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8331]]
+
* Gene: [[Tiso_gene_3513]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-athaliana]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_7322]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31302 31302]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05606 R05606]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06366 R06366]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P44488 P44488]
+
{{#set: common name=perillyl aldehyde dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/Q9CF50 Q9CF50]
+
{{#set: ec number=EC-1.2.1.3}}
−
** [http://www.uniprot.org/uniprot/P24215 P24215]
+
{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: in pathway=}}
−
{{#set: common name=mannonate_dehydratase}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: ec number=EC-4.2.1.8}}
+
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
−
{{#set: gene associated=Tiso_gene_8331}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: in pathway=PWY-7242}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:23, 21 March 2018

Reaction RXN-14280

  • direction:
    • REVERSIBLE
  • common name:
    • perillyl aldehyde dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 perillyl aldehyde[c] + 1 H2O[c] <=> 1 perillate[c] + 1 NADH[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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