Difference between revisions of "Tiso gene 12618"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** xylitol_oxidas...")
(Created page with "Category:Gene == Gene Tiso_gene_12618 == * right end position: ** 6797 * transcription direction: ** NEGATIVE * left end position: ** 2352 * centisome position: ** 34.4564...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] ==
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== Gene Tiso_gene_12618 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6797
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* common name:
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* transcription direction:
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** ORF
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** NEGATIVE
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** xylitol_oxidase
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* left end position:
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** mitochondrial_l-galactono-_-lactone_dehydrogenase
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** 2352
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.3.37 EC-1.1.3.37]
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** 34.45649   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.6.3.50-RXN]]
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** 1 [[CPD-356]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[ADENOSINETRIPHOSPHATASE-RXN]]
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** 1 D-arabinono-1,4-lactone[c] '''+''' 1 oxygen[c] '''=>''' 1 dehydro-D-arabinono-1,4-lactone[c] '''+''' 1 hydrogen peroxide[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[ATPASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ATPSYN-RXN]]
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* [[Tiso_gene_210]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***EC-NUMBER
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== Pathways associated ==
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* [[Tiso_gene_14187]]
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* [[PWY-7219]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6787]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=6797}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2352}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
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{{#set: centisome position=34.45649    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.6.3.50-RXN|ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN|ATPSYN-RXN}}
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{{#set: common name=ORF}}
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{{#set: pathway associated=PWY-7219}}
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{{#set: common name=xylitol_oxidase}}
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{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
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{{#set: ec number=EC-1.1.3.37}}
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{{#set: gene associated=Tiso_gene_210|Tiso_gene_14187|Tiso_gene_6787}}
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{{#set: in pathway=PWY3O-6}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:07, 21 March 2018

Gene Tiso_gene_12618

  • right end position:
    • 6797
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2352
  • centisome position:
    • 34.45649
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_12618&oldid=39664"