|
|
| (2 intermediate revisions by the same user not shown) |
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=16S-rRNA-2-O-methylcytidine1402 16S-rRNA-2-O-methylcytidine1402] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** dihydrodipicolinate_synthase | + | ** a 2'-O-methylcytidine1402 in 16S rRNA |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| − | ** dihydropicolinate synthetase
| |
| − | ** dihydrodipicolinic acid synthase
| |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c]
| + | * [[RXN-11637]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c] '''+''' 1 H2O[c] '''+''' 1 H+[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_14829]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
| + | |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941] | + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: common name=a 2'-O-methylcytidine1402 in 16S rRNA}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
| + | {{#set: produced by=RXN-11637}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43797 P43797]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O26892 O26892]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P19808 P19808]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O05969 O05969]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q04796 Q04796]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q57695 Q57695]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O25657 O25657]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67216 O67216]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29352 O29352]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84366 O84366]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P63945 P63945]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43038 Q43038]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49423 P49423]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55513 Q55513]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42948 Q42948]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q42940 Q42940]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O86841 O86841]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24847 P24847]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24846 P24846]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=dihydrodipicolinate_synthase}} | + | |
| − | {{#set: ec number=EC-4.3.3.7}}
| + | |
| − | {{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
| + | |
| − | {{#set: gene associated=Tiso_gene_14829}}
| + | |
| − | {{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
| + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
