Difference between revisions of "PWY6666-2"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTREDUCTOISOM-RXN ACETOLACTREDUCTOISOM-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTREDUCTOISOM-RXN ACETOLACTREDUCTOISOM-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** 2,3-Dihydroxy-3-methylbutanoate:DP+ oxidoreductase (isomerizing), chloroplast
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** 5,6-dimethylbenzimidazole biosynthesis I (aerobic)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.86 EC-1.1.1.86]
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* Synonym(s):
 
* Synonym(s):
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** DMB biosynthesis I
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''3''' reactions in the full pathway
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** 1 [[NADP]][c] '''+''' 1 [[CPD-13357]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[PROTON]][c]
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* [[RIBOFLAVINKIN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 NADP+[c] '''+''' 1 (2R)-2,3-dihydroxy-3-methylbutanoate[c] '''<=>''' 1 NADPH[c] '''+''' 1 (S)-2-acetolactate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_1086]]
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== Genes associated with this reaction  ==
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*** [[Tiso_gene_16837]]
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Genes have been associated with this reaction based on different elements listed below.
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** 4 reconstruction source(s) associated:
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* [[Tiso_gene_10173]]
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*** [[orthology-athaliana]]
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[VALSYN-PWY]], L-valine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=VALSYN-PWY VALSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=FMNREDUCT-RXN FMNREDUCT-RXN]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8771 RXN-8771]
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* [[PWY-7111]], pyruvate fermentation to isobutanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7111 PWY-7111]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22068 22068]
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{{#set: common name=5,6-dimethylbenzimidazole biosynthesis I (aerobic)}}
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* LIGAND-RXN:
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{{#set: common name=DMB biosynthesis I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04439 R04439]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P06168 P06168]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/P44822 P44822]
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** [http://www.uniprot.org/uniprot/O25097 O25097]
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** [http://www.uniprot.org/uniprot/Q02138 Q02138]
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** [http://www.uniprot.org/uniprot/Q57179 Q57179]
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** [http://www.uniprot.org/uniprot/Q9JTI3 Q9JTI3]
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** [http://www.uniprot.org/uniprot/Q9PHN5 Q9PHN5]
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** [http://www.uniprot.org/uniprot/P05793 P05793]
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** [http://www.uniprot.org/uniprot/P38674 P38674]
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** [http://www.uniprot.org/uniprot/Q59500 Q59500]
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** [http://www.uniprot.org/uniprot/Q01292 Q01292]
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** [http://www.uniprot.org/uniprot/Q05758 Q05758]
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** [http://www.uniprot.org/uniprot/O82043 O82043]
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** [http://www.uniprot.org/uniprot/P78827 P78827]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=2,3-Dihydroxy-3-methylbutanoate:DP+ oxidoreductase (isomerizing), chloroplast}}
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{{#set: ec number=EC-1.1.1.86}}
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{{#set: gene associated=Tiso_gene_10173}}
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{{#set: in pathway=VALSYN-PWY|PWY-7111}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation}}
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Revision as of 17:57, 18 March 2018

Pathway PWY-5523

  • taxonomic range:
  • common name:
    • 5,6-dimethylbenzimidazole biosynthesis I (aerobic)
  • Synonym(s):
    • DMB biosynthesis I

Reaction(s) found

1 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY6666-2&oldid=20869"