Difference between revisions of "RXN-17927"

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(Created page with "Category:Gene == Gene Tiso_gene_11551 == * left end position: ** 390 * transcription direction: ** POSITIVE * right end position: ** 5401 * centisome position: ** 5.055087...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_11551 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] ==
−
* left end position:
+
* direction:
−
** 390
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ORF
−
* right end position:
+
** map_kinase_phosphatase_1
−
** 5401
+
** dual_specificity_protein_phosphatase_cdc14a
−
* centisome position:
+
** tyrosine_phosphatase_family_protein
−
** 5.0550876   
+
** dual_specificity_phosphatase
 +
** receptor-type_tyrosine-protein_phosphatase_delta-_partial
 +
** probable_tyrosine-protein_phosphatase_dg1060
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.48 EC-3.1.3.48]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-11109]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[Protein-tyrosine-phosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Protein-Tyrosines]][c] '''+''' 1 [[Pi]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 a [protein]-L-tyrosine phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 a [protein]-L-tyrosine[c] '''+''' 1 phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_17987]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3461]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_19716]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8252]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_20064]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_12920]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_807]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_13113]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3693]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15176]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13635]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2578]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_3751]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_19083]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16782]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4164]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_12712]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=390}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02585 R02585]
−
{{#set: right end position=5401}}
+
* UNIPROT:
−
{{#set: centisome position=5.0550876    }}
+
** [http://www.uniprot.org/uniprot/P06800 P06800]
−
{{#set: reaction associated=RXN-11109}}
+
** [http://www.uniprot.org/uniprot/P20483 P20483]
 +
** [http://www.uniprot.org/uniprot/P23748 P23748]
 +
** [http://www.uniprot.org/uniprot/P20417 P20417]
 +
** [http://www.uniprot.org/uniprot/P18433 P18433]
 +
** [http://www.uniprot.org/uniprot/P24666 P24666]
 +
** [http://www.uniprot.org/uniprot/Q06180 Q06180]
 +
** [http://www.uniprot.org/uniprot/P30307 P30307]
 +
** [http://www.uniprot.org/uniprot/P25044 P25044]
 +
** [http://www.uniprot.org/uniprot/P27574 P27574]
 +
** [http://www.uniprot.org/uniprot/P29074 P29074]
 +
** [http://www.uniprot.org/uniprot/P26045 P26045]
 +
** [http://www.uniprot.org/uniprot/P35234 P35234]
 +
** [http://www.uniprot.org/uniprot/P35832 P35832]
 +
** [http://www.uniprot.org/uniprot/P30304 P30304]
 +
** [http://www.uniprot.org/uniprot/Q03019 Q03019]
 +
** [http://www.uniprot.org/uniprot/P11064 P11064]
 +
** [http://www.uniprot.org/uniprot/P30306 P30306]
 +
** [http://www.uniprot.org/uniprot/P30309 P30309]
 +
** [http://www.uniprot.org/uniprot/P43378 P43378]
 +
** [http://www.uniprot.org/uniprot/P29349 P29349]
 +
** [http://www.uniprot.org/uniprot/P29351 P29351]
 +
** [http://www.uniprot.org/uniprot/Q9W0G1 Q9W0G1]
 +
** [http://www.uniprot.org/uniprot/P23471 P23471]
 +
** [http://www.uniprot.org/uniprot/P35235 P35235]
 +
** [http://www.uniprot.org/uniprot/P08575 P08575]
 +
** [http://www.uniprot.org/uniprot/P18052 P18052]
 +
** [http://www.uniprot.org/uniprot/P35822 P35822]
 +
** [http://www.uniprot.org/uniprot/P23470 P23470]
 +
** [http://www.uniprot.org/uniprot/P34138 P34138]
 +
** [http://www.uniprot.org/uniprot/Q24495 Q24495]
 +
** [http://www.uniprot.org/uniprot/Q9W4F5 Q9W4F5]
 +
** [http://www.uniprot.org/uniprot/Q15426 Q15426]
 +
** [http://www.uniprot.org/uniprot/P41499 P41499]
 +
** [http://www.uniprot.org/uniprot/Q28613 Q28613]
 +
** [http://www.uniprot.org/uniprot/Q28182 Q28182]
 +
** [http://www.uniprot.org/uniprot/P15273 P15273]
 +
** [http://www.uniprot.org/uniprot/Q91870 Q91870]
 +
** [http://www.uniprot.org/uniprot/Q91976 Q91976]
 +
** [http://www.uniprot.org/uniprot/Q12923 Q12923]
 +
** [http://www.uniprot.org/uniprot/P41893 P41893]
 +
** [http://www.uniprot.org/uniprot/Q62132 Q62132]
 +
** [http://www.uniprot.org/uniprot/Q92124 Q92124]
 +
** [http://www.uniprot.org/uniprot/P23468 P23468]
 +
** [http://www.uniprot.org/uniprot/Q62917 Q62917]
 +
** [http://www.uniprot.org/uniprot/Q64696 Q64696]
 +
** [http://www.uniprot.org/uniprot/P40347 P40347]
 +
** [http://www.uniprot.org/uniprot/P16620 P16620]
 +
** [http://www.uniprot.org/uniprot/P30305 P30305]
 +
** [http://www.uniprot.org/uniprot/P29352 P29352]
 +
** [http://www.uniprot.org/uniprot/Q05909 Q05909]
 +
** [http://www.uniprot.org/uniprot/Q91871 Q91871]
 +
** [http://www.uniprot.org/uniprot/P49446 P49446]
 +
** [http://www.uniprot.org/uniprot/Q9CDL7 Q9CDL7]
 +
** [http://www.uniprot.org/uniprot/P30311 P30311]
 +
** [http://www.uniprot.org/uniprot/Q64487 Q64487]
 +
** [http://www.uniprot.org/uniprot/Q9JU65 Q9JU65]
 +
** [http://www.uniprot.org/uniprot/P35992 P35992]
 +
** [http://www.uniprot.org/uniprot/P0AAB2 P0AAB2]
 +
** [http://www.uniprot.org/uniprot/Q9PN39 Q9PN39]
 +
** [http://www.uniprot.org/uniprot/Q16825 Q16825]
 +
** [http://www.uniprot.org/uniprot/Q12913 Q12913]
 +
** [http://www.uniprot.org/uniprot/P48967 P48967]
 +
** [http://www.uniprot.org/uniprot/Q60998 Q60998]
 +
** [http://www.uniprot.org/uniprot/Q90815 Q90815]
 +
** [http://www.uniprot.org/uniprot/Q90816 Q90816]
 +
** [http://www.uniprot.org/uniprot/Q90817 Q90817]
 +
** [http://www.uniprot.org/uniprot/P30310 P30310]
 +
** [http://www.uniprot.org/uniprot/Q62604 Q62604]
 +
** [http://www.uniprot.org/uniprot/Q64605 Q64605]
 +
** [http://www.uniprot.org/uniprot/Q05209 Q05209]
 +
** [http://www.uniprot.org/uniprot/Q60673 Q60673]
 +
** [http://www.uniprot.org/uniprot/Q62130 Q62130]
 +
** [http://www.uniprot.org/uniprot/Q15678 Q15678]
 +
** [http://www.uniprot.org/uniprot/Q92932 Q92932]
 +
** [http://www.uniprot.org/uniprot/Q90687 Q90687]
 +
** [http://www.uniprot.org/uniprot/P79923 P79923]
 +
** [http://www.uniprot.org/uniprot/O00197 O00197]
 +
** [http://www.uniprot.org/uniprot/Q61042 Q61042]
 +
** [http://www.uniprot.org/uniprot/Q9ERM5 Q9ERM5]
 +
** [http://www.uniprot.org/uniprot/P35236 P35236]
 +
** [http://www.uniprot.org/uniprot/P35821 P35821]
 +
** [http://www.uniprot.org/uniprot/Q06124 Q06124]
 +
** [http://www.uniprot.org/uniprot/O13016 O13016]
 +
** [http://www.uniprot.org/uniprot/P23467 P23467]
 +
** [http://www.uniprot.org/uniprot/P23469 P23469]
 +
** [http://www.uniprot.org/uniprot/P35233 P35233]
 +
** [http://www.uniprot.org/uniprot/P30634 P30634]
 +
** [http://www.uniprot.org/uniprot/P28827 P28827]
 +
** [http://www.uniprot.org/uniprot/P28828 P28828]
 +
** [http://www.uniprot.org/uniprot/Q64497 Q64497]
 +
** [http://www.uniprot.org/uniprot/P29350 P29350]
 +
** [http://www.uniprot.org/uniprot/P30303 P30303]
 +
** [http://www.uniprot.org/uniprot/P32586 P32586]
 +
** [http://www.uniprot.org/uniprot/P32587 P32587]
 +
** [http://www.uniprot.org/uniprot/Q02256 Q02256]
 +
** [http://www.uniprot.org/uniprot/Q8VBV0 Q8VBV0]
 +
** [http://www.uniprot.org/uniprot/Q8R169 Q8R169]
 +
** [http://www.uniprot.org/uniprot/Q64512 Q64512]
 +
** [http://www.uniprot.org/uniprot/Q29029 Q29029]
 +
** [http://www.uniprot.org/uniprot/P38148 P38148]
 +
** [http://www.uniprot.org/uniprot/Q64604 Q64604]
 +
** [http://www.uniprot.org/uniprot/Q63745 Q63745]
 +
** [http://www.uniprot.org/uniprot/P39155 P39155]
 +
** [http://www.uniprot.org/uniprot/Q64494 Q64494]
 +
** [http://www.uniprot.org/uniprot/Q62728 Q62728]
 +
** [http://www.uniprot.org/uniprot/Q64502 Q64502]
 +
** [http://www.uniprot.org/uniprot/Q64504 Q64504]
 +
** [http://www.uniprot.org/uniprot/Q46630 Q46630]
 +
** [http://www.uniprot.org/uniprot/Q17024 Q17024]
 +
** [http://www.uniprot.org/uniprot/P35831 P35831]
 +
** [http://www.uniprot.org/uniprot/Q00684 Q00684]
 +
** [http://www.uniprot.org/uniprot/Q16827 Q16827]
 +
** [http://www.uniprot.org/uniprot/P06652 P06652]
 +
** [http://www.uniprot.org/uniprot/P29461 P29461]
 +
** [http://www.uniprot.org/uniprot/Q29500 Q29500]
 +
** [http://www.uniprot.org/uniprot/Q62370 Q62370]
 +
** [http://www.uniprot.org/uniprot/Q92735 Q92735]
 +
** [http://www.uniprot.org/uniprot/Q45408 Q45408]
 +
** [http://www.uniprot.org/uniprot/O82710 O82710]
 +
** [http://www.uniprot.org/uniprot/O88488 O88488]
 +
** [http://www.uniprot.org/uniprot/O88902 O88902]
 +
** [http://www.uniprot.org/uniprot/O94044 O94044]
 +
** [http://www.uniprot.org/uniprot/O44329 O44329]
 +
** [http://www.uniprot.org/uniprot/O76282 O76282]
 +
** [http://www.uniprot.org/uniprot/Q98936 Q98936]
 +
** [http://www.uniprot.org/uniprot/Q91054 Q91054]
 +
** [http://www.uniprot.org/uniprot/Q22582 Q22582]
 +
** [http://www.uniprot.org/uniprot/Q39491 Q39491]
 +
** [http://www.uniprot.org/uniprot/O65190 O65190]
 +
** [http://www.uniprot.org/uniprot/P16621 P16621]
 +
** [http://www.uniprot.org/uniprot/P10586 P10586]
 +
** [http://www.uniprot.org/uniprot/Q64224 Q64224]
 +
** [http://www.uniprot.org/uniprot/P18031 P18031]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=map_kinase_phosphatase_1}}
 +
{{#set: common name=dual_specificity_protein_phosphatase_cdc14a}}
 +
{{#set: common name=tyrosine_phosphatase_family_protein}}
 +
{{#set: common name=dual_specificity_phosphatase}}
 +
{{#set: common name=receptor-type_tyrosine-protein_phosphatase_delta-_partial}}
 +
{{#set: common name=probable_tyrosine-protein_phosphatase_dg1060}}
 +
{{#set: ec number=EC-3.1.3.48}}
 +
{{#set: gene associated=Tiso_gene_17987|Tiso_gene_3461|Tiso_gene_19716|Tiso_gene_8252|Tiso_gene_20064|Tiso_gene_12920|Tiso_gene_807|Tiso_gene_13113|Tiso_gene_3693|Tiso_gene_15176|Tiso_gene_13635|Tiso_gene_2578|Tiso_gene_3751|Tiso_gene_19083|Tiso_gene_16782|Tiso_gene_4164|Tiso_gene_12712}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:00, 18 March 2018

Reaction PROTEIN-TYROSINE-PHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • map_kinase_phosphatase_1
    • dual_specificity_protein_phosphatase_cdc14a
    • tyrosine_phosphatase_family_protein
    • dual_specificity_phosphatase
    • receptor-type_tyrosine-protein_phosphatase_delta-_partial
    • probable_tyrosine-protein_phosphatase_dg1060
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17927&oldid=21189"