Difference between revisions of "PWY-5059"

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(Created page with "Category:Gene == Gene Tiso_gene_14463 == * left end position: ** 1112 * transcription direction: ** POSITIVE * right end position: ** 1637 * centisome position: ** 19.7128...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8014 RXN-8014] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_14463 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8014 RXN-8014] ==
* left end position:
+
* direction:
** 1112
+
** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** POSITIVE
+
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
* right end position:
+
** 1637
+
* centisome position:
+
** 19.712816   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[KDOTRANS-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[SINAPALDEHYDE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[SINAPATE]][c] '''+''' 2 [[PROTON]][c]
***automated-name-match
+
* With common name(s):
** [[pantograph]]-[[athaliana]]
+
** 1 sinapaldehyde[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c] '''=>''' 1 NADPH[c] '''+''' 1 sinapate[c] '''+''' 2 H+[c]
* [[KDOTRANS2-RXN]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_3513]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
== Pathways associated ==
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== Pathways ==
* [[KDOSYN-PWY]]
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* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
* [[PWY-7675]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=1112}}
+
* LIGAND-RXN:
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07442 R07442]
{{#set: right end position=1637}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=19.712816    }}
+
{{#set: ec number=EC-1.2.1}}
{{#set: reaction associated=KDOTRANS-RXN|KDOTRANS2-RXN}}
+
{{#set: gene associated=Tiso_gene_3513}}
{{#set: pathway associated=KDOSYN-PWY|PWY-7675}}
+
{{#set: in pathway=PWY-5168}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:20, 18 March 2018

Reaction RXN-8014

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 sinapaldehyde[c] + 1 NADP+[c] + 1 H2O[c] => 1 NADPH[c] + 1 sinapate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5168, ferulate and sinapate biosynthesis: PWY-5168
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links