Difference between revisions of "RXN-13430"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7828 RXN-7828] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
 +
** 3-hydroxyacyl-_dehydrogenase
 +
** hydroxyacyl-coenzyme_a_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1 EC-2.4.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-12575]][c] '''+''' 1 [[PELARGONIDIN-3-GLUCOSIDE-CMPD]][c] '''=>''' 1 [[CPD-7137]][c] '''+''' 1 [[UDP]][c]
+
** 1 [[CPD-19151]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19153]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 UDP-α-D-glucose[c] '''+''' 1 pelargonidin-3-O-β-D-glucoside[c] '''=>''' 1 pelargonidin-3,5-di-O-β-D-glucoside[c] '''+''' 1 UDP[c]
+
** 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3452]]
+
* [[Tiso_gene_18838]]
−
** [[pantograph]]-[[athaliana]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14026]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_18839]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5857]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14262]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5268]], salvianin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5268 PWY-5268]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5139]], pelargonidin conjugates biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5139 PWY-5139]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.4.1}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
−
{{#set: gene associated=Tiso_gene_3452}}
+
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
−
{{#set: in pathway=PWY-5268|PWY-5139}}
+
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.1.1.35}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=Tiso_gene_18838|Tiso_gene_14026|Tiso_gene_18839|Tiso_gene_5857|Tiso_gene_14262}}
−
{{#set: reconstruction source=athaliana}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:35, 18 March 2018

Reaction RXN-17798

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
    • 3-hydroxyacyl-_dehydrogenase
    • hydroxyacyl-coenzyme_a_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] + 1 NAD+[c] => 1 3-oxo-(5Z)-dodecenoyl-CoA[c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13430&oldid=25424"