Difference between revisions of "FPPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1226 RXN-1226] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_sy...")
(Created page with "Category:Gene == Gene Tiso_gene_17718 == * left end position: ** 372 * transcription direction: ** POSITIVE * right end position: ** 3165 * centisome position: ** 10.62857...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1226 RXN-1226] ==
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== Gene Tiso_gene_17718 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 372
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* common name:
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* transcription direction:
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** digalactosyldiacylglycerol_synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.184 EC-2.4.1.184]
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** 3165
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* centisome position:
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** 10.6285715   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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** 2 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[CPD-10363]][c]
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** [[pantograph]]-[[athaliana]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 2 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''=>''' 1 a 1,2-diacyl-sn-glycerol[c] '''+''' 1 a 1,2-diacyl-3-O-[β-D-galactosyl-(1→6)-β-D-galactosyl]-sn-glycerol[c]
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* [[ASPAMINOTRANS-RXN]]
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** experimental_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_2142]]
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** [[pantograph]]-[[athaliana]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[athaliana]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[CYSTEINE-AMINOTRANSFERASE-RXN]]
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* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
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** [[pantograph]]-[[athaliana]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[annotation]]:
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* [[PHEAMINOTRANS-RXN]]
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** [[pathwaytools]]:
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** [[pantograph]]-[[athaliana]]
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*** [[in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN-10814]]
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-11737]]
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13697]]
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[TYROSINE-AMINOTRANSFERASE-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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* [[TYRSYN]]
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* [[PWY-7383]]
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* [[ASPARTATESYN-PWY]]
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* [[PWY-7117]]
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* [[PWY-7115]]
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* [[PWY-5754]]
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* [[PWY-5329]]
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* [[PWY-5048]]
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* [[PWY-5913]]
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* [[CYSTEINE-DEG-PWY]]
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* [[PWY-6643]]
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* [[PWY-6642]]
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* [[PWY-7432]]
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* [[PWY-7518]]
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* [[ANAPHENOXI-PWY]]
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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* [[TYRFUMCAT-PWY]]
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* [[PWY-3581]]
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* [[ASPARTATE-DEG1-PWY]]
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* [[PWY0-1534]]
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* [[PWY-5886]]
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* [[GLUTDEG-PWY]]
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* [[PWY-6318]]
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* [[PWY-5079]]
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* [[PWY-7514]]
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* [[PWY3O-4108]]
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* [[PHESYN]]
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* [[PWY-6638]]
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* [[ASPARAGINE-DEG1-PWY-1]]
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* [[PWY-5151]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=372}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15921 15921]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3165}}
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{{#set: common name=digalactosyldiacylglycerol_synthase}}
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{{#set: centisome position=10.6285715    }}
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{{#set: ec number=EC-2.4.1.184}}
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{{#set: reaction associated=3-SULFINOALANINE-AMINOTRANSFERASE-RXN|ASPAMINOTRANS-RXN|CYSTEINE-AMINOTRANSFERASE-RXN|PHEAMINOTRANS-RXN|RXN-10814|RXN-11737|RXN-13697|TYROSINE-AMINOTRANSFERASE-RXN}}
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{{#set: gene associated=Tiso_gene_2142}}
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{{#set: pathway associated=TYRSYN|PWY-7383|ASPARTATESYN-PWY|PWY-7117|PWY-7115|PWY-5754|PWY-5329|PWY-5048|PWY-5913|CYSTEINE-DEG-PWY|PWY-6643|PWY-6642|PWY-7432|PWY-7518|ANAPHENOXI-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|TYRFUMCAT-PWY|PWY-3581|ASPARTATE-DEG1-PWY|PWY0-1534|PWY-5886|GLUTDEG-PWY|PWY-6318|PWY-5079|PWY-7514|PWY3O-4108|PHESYN|PWY-6638|ASPARAGINE-DEG1-PWY-1|PWY-5151}}
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{{#set: in pathway=PWY-401}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:37, 18 March 2018

Gene Tiso_gene_17718

  • left end position:
    • 372
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3165
  • centisome position:
    • 10.6285715
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=FPPSYN-RXN&oldid=25709"