Difference between revisions of "RXN-13441"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14387 RXN-14387] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2-ISOPROPYLMALATESYN-RXN 2-ISOPROPYLMALATESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14387 RXN-14387] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 2-isopropylmalate_synthase_chloroplastic
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/2.3.3.13 EC-2.3.3.13]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
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** 1 [[CD-2S-SP-Complex]][c] '''+''' 2 [[FE+3]][c] '''=>''' 1 [[CD-SP-2Fe2S-Complex]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 coenzyme A[c] '''+''' 1 (2S)-2-isopropylmalate[c]
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** 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c] '''+''' 2 Fe3+[c] '''=>''' 1 a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11453]]
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* [[Tiso_gene_15502]]
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** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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−
***EC-NUMBER
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−
** [[pantograph]]-[[athaliana]]
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−
** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
−
*** [[synechocystis]]
+
* Category: [[annotation]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
* [[manual]]:
+
** Source: [[annotation-in-silico_annotation]]
−
** [[primary_network]]
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*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21524 21524]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01213 R01213]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P06208 P06208]
 
−
** [http://www.uniprot.org/uniprot/Q58595 Q58595]
 
−
** [http://www.uniprot.org/uniprot/P09151 P09151]
 
−
** [http://www.uniprot.org/uniprot/Q9PLV9 Q9PLV9]
 
−
** [http://www.uniprot.org/uniprot/Q9JUK6 Q9JUK6]
 
−
** [http://www.uniprot.org/uniprot/Q58787 Q58787]
 
−
** [http://www.uniprot.org/uniprot/P94565 P94565]
 
−
** [http://www.uniprot.org/uniprot/Q9JP75 Q9JP75]
 
−
** [http://www.uniprot.org/uniprot/Q02141 Q02141]
 
−
** [http://www.uniprot.org/uniprot/P48575 P48575]
 
−
** [http://www.uniprot.org/uniprot/O86511 O86511]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-isopropylmalate_synthase_chloroplastic}}
+
{{#set: gene associated=Tiso_gene_15502}}
−
{{#set: ec number=EC-2.3.3.13}}
+
{{#set: in pathway=PWY-7250}}
−
{{#set: gene associated=Tiso_gene_11453}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:40, 18 March 2018

Reaction RXN-14387

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c] + 2 Fe3+[c] => 1 a [cysteine desulfurase]-[scaffold protein-(2Fe-2S)] complex[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13441&oldid=26002"