Difference between revisions of "RXN-13414"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] == * smiles: ** C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNARA-8002 RXNARA-8002] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** prephytoene-diphosphate...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNARA-8002 RXNARA-8002] ==
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* smiles:
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* direction:
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** C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C=NC(C([O-])=O)=C(N)1))O2)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XFVULMDJZXYMSG-ZIYNGMLESA-K
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* common name:
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** 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
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* molecular weight:
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** 336.174   
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* Synonym(s):
 
* Synonym(s):
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** 1-(5-phosphoribosyl)-4-carboxy-5-aminoimidazole
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** prephytoene-diphosphate synthase
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** 5'-P-ribosyl-4-carboxy-5-aminoimidazole
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** PSase
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** 5'-phosphoribosyl-4-carboxy-5-aminoimidazole
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** geranylgeranyl-diphosphate geranylgeranyltransferase
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** 5-phosphoribosyl-4-carboxy-5-aminoimidazole
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** 1-(5'-phosphoribosyl)-5-amino-4-imidazole carboxylate
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** 1-(5'-phosphoribosyl)-4-carboxy-5-aminoimidazole
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** CAIR
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** 4-carboxyaminoimidazole ribonucleotide
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** phosphoribosyl-carboxy-aminoimidazole
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[SAICARSYN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-464]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-12321]][c]
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* [[AIRCARBOXY-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 prephytoene diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 15-cis-phytoene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15914]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5942]], trans-lycopene biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5942 PWY-5942]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''5''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* BIGG : 5aizc
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R07270 R07270]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24916886 24916886]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB06273
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{{#set: common name=prephytoene-diphosphate synthase|PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15914}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04751 C04751]
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{{#set: in pathway=PWY-6287|PWY-5942|PWY-6475}}
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* CHEBI:
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{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58564 58564]
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{{#set: reconstruction source=orthology-esiliculosus}}
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* METABOLIGHTS : MTBLC58564
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C=NC(C([O-])=O)=C(N)1))O2)}}
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{{#set: inchi key=InChIKey=XFVULMDJZXYMSG-ZIYNGMLESA-K}}
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{{#set: common name=5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate}}
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{{#set: molecular weight=336.174    }}
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{{#set: common name=1-(5-phosphoribosyl)-4-carboxy-5-aminoimidazole|5'-P-ribosyl-4-carboxy-5-aminoimidazole|5'-phosphoribosyl-4-carboxy-5-aminoimidazole|5-phosphoribosyl-4-carboxy-5-aminoimidazole|1-(5'-phosphoribosyl)-5-amino-4-imidazole carboxylate|1-(5'-phosphoribosyl)-4-carboxy-5-aminoimidazole|CAIR|4-carboxyaminoimidazole ribonucleotide|phosphoribosyl-carboxy-aminoimidazole}}
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{{#set: consumed by=SAICARSYN-RXN}}
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{{#set: produced by=AIRCARBOXY-RXN}}
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Revision as of 18:45, 18 March 2018

Reaction RXNARA-8002

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • prephytoene-diphosphate synthase
    • PSase
    • geranylgeranyl-diphosphate geranylgeranyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 prephytoene diphosphate[c] => 1 diphosphate[c] + 1 15-cis-phytoene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6287, neurosporene biosynthesis: PWY-6287
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5942, trans-lycopene biosynthesis I (bacteria): PWY-5942
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 5 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13414&oldid=26611"