Difference between revisions of "RXN-8348"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.32-RXN 2.4.1.32-RXN] == * direction: ** REVERSIBLE * common name: ** family_2_glycosyl_transf...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.32-RXN 2.4.1.32-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** family_2_glycosyl_transferase
+
** glutamate-5-semialdehyde_dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.32 EC-2.4.1.32]
+
** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[Glucomannans]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[Glucomannans]][c]
+
** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GDP-&alpha;-D-mannose[c] '''+''' 1 a glucomannan[c] '''<=>''' 1 GDP[c] '''+''' 1 a glucomannan[c]
+
** 1 &gamma;-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_322]]
+
* [[Tiso_gene_16634]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_16258]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-athaliana]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03829 R03829]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=family_2_glycosyl_transferase}}
+
** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
−
{{#set: ec number=EC-2.4.1.32}}
+
** [http://www.uniprot.org/uniprot/P45121 P45121]
−
{{#set: gene associated=Tiso_gene_322}}
+
** [http://www.uniprot.org/uniprot/P53000 P53000]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P07004 P07004]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P17857 P17857]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P45638 P45638]
−
{{#set: reconstruction source=in-silico_annotation}}
+
** [http://www.uniprot.org/uniprot/P54885 P54885]
 +
** [http://www.uniprot.org/uniprot/O04226 O04226]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=glutamate-5-semialdehyde_dehydrogenase}}
 +
{{#set: ec number=EC-1.2.1.41}}
 +
{{#set: gene associated=Tiso_gene_16634|Tiso_gene_16258}}
 +
{{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:52, 18 March 2018

Reaction GLUTSEMIALDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutamate-5-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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