Difference between revisions of "CPD-8984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** beta-glucosidase-lik...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] == * direction: ** LEFT-TO-RIGHT * common name: ** caffeate_o-methyltransferase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10769 RXN-10769] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** caffeate_o-methyltransferase
−
** beta-glucosidase-like_chloroplastic
+
−
** low_quality_protein:_beta-glucosidase-like_chloroplastic-like
+
−
** beta_glucosidase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
+
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-11641]][c] '''=>''' 1 [[Glucopyranose]][c] '''+''' 1 [[CPD-182]][c]
+
** 1 [[5-HYDROXY-CONIFERALDEHYDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[SINAPALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 4-methylumbelliferyl glucoside[c] '''=>''' 1 D-glucopyranose[c] '''+''' 1 4-methylumbelliferone[c]
+
** 1 5-hydroxy-coniferaldehyde[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 sinapaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6187]]
+
* [[Tiso_gene_18257]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_8669]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5836]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10001]]
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_13306]]
+
* [[Tiso_gene_18971]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
* [[Tiso_gene_15067]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3467]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13305]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6007]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2344]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6188]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_2843]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15066]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_6497]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5168]], ferulate and sinapate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5168 PWY-5168]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
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* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06576 R06576]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=caffeate_o-methyltransferase}}
−
{{#set: common name=beta-glucosidase-like_chloroplastic}}
+
{{#set: ec number=EC-2.1.1.68}}
−
{{#set: common name=low_quality_protein:_beta-glucosidase-like_chloroplastic-like}}
+
{{#set: gene associated=Tiso_gene_18257|Tiso_gene_18971}}
−
{{#set: common name=beta_glucosidase}}
+
{{#set: in pathway=PWY-361|PWY-5168}}
−
{{#set: ec number=EC-3.2.1.21}}
+
−
{{#set: gene associated=Tiso_gene_6187|Tiso_gene_8669|Tiso_gene_5836|Tiso_gene_10001|Tiso_gene_13306|Tiso_gene_15067|Tiso_gene_3467|Tiso_gene_13305|Tiso_gene_6007|Tiso_gene_2344|Tiso_gene_6188|Tiso_gene_2843|Tiso_gene_15066|Tiso_gene_6497}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:02, 10 January 2018

Reaction RXN-1143

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • caffeate_o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5168, ferulate and sinapate biosynthesis: PWY-5168
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-8984&oldid=11311"