Difference between revisions of "RXN-13300"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.12-RXN 3.1.6.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** arylsulfatase_b * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_16872 == * right end position: ** 3524 * transcription direction: ** POSITIVE * left end position: ** 185 * centisome position: ** 4.540992...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.6.12-RXN 3.1.6.12-RXN] ==
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== Gene Tiso_gene_16872 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3524
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* common name:
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* transcription direction:
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** arylsulfatase_b
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.1.6.12 EC-3.1.6.12]
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** 185
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* centisome position:
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** 4.540992   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.232-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''=>''' 1 [[SULFATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Chondroitin-N-acetyl-galactosamines]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 [chondroitin]-4-O-sulfo-N-acetylgalactosamine[c] '''=>''' 1 sulfate[c] '''+''' 1 H+[c] '''+''' 1 [chondroitin]-N-acetyl-galactosamine[c]
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* Reaction: [[RXN-5462]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15619]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=3524}}
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** [http://www.uniprot.org/uniprot/P33727 P33727]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P50430 P50430]
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{{#set: left end position=185}}
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** [http://www.uniprot.org/uniprot/P15848 P15848]
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{{#set: centisome position=4.540992    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=2.4.1.232-RXN|RXN-5462}}
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{{#set: common name=arylsulfatase_b}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: ec number=EC-3.1.6.12}}
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{{#set: gene associated=Tiso_gene_15619}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:47, 21 March 2018

Gene Tiso_gene_16872

  • right end position:
    • 3524
  • transcription direction:
    • POSITIVE
  • left end position:
    • 185
  • centisome position:
    • 4.540992
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13300&oldid=30194"