Difference between revisions of "Tiso gene 18518"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_13013 == * left end position: ** 40 * transcription direction: ** POSITIVE * right end position: ** 2418 * centisome position: ** 0.6084575...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase_d...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_13013 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPKIN-RXN CDPKIN-RXN] ==
−
* left end position:
+
* direction:
−
** 40
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ORF
−
* right end position:
+
** adenylate_kinase_domain-containing_protein_1
−
** 2418
+
** nucleoside_diphosphate_kinase
−
* centisome position:
+
* ec number:
−
** 0.60845757   
+
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[1.1.1.8-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CTP]][c] '''+''' 1 [[ADP]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 CDP[c] '''+''' 1 ATP[c] '''=>''' 1 CTP[c] '''+''' 1 ADP[c]
−
***ec-number
+
 
−
** [[pantograph]]-[[esiliculosus]]
+
== Genes associated with this reaction  ==
−
** [[pantograph]]-[[creinhardtii]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[GLYC3PDEHYDROGBIOSYN-RXN]]
+
* Gene: [[Tiso_gene_17272]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-in-silico_annotation]]
−
== Pathways associated ==
+
*** Assignment: EC-NUMBER
−
* [[PWY-6118]]
+
* Gene: [[Tiso_gene_9290]]
−
* [[PWY-7385]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-5981]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-5667]]
+
* Gene: [[Tiso_gene_18224]]
−
* [[PWY0-1319]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7411]]
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_17271]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_195]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16529]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=40}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25237 25237]
−
{{#set: right end position=2418}}
+
* LIGAND-RXN:
−
{{#set: centisome position=0.60845757    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00570 R00570]
−
{{#set: reaction associated=1.1.1.8-RXN|GLYC3PDEHYDROGBIOSYN-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: pathway associated=PWY-6118|PWY-7385|PWY-5981|PWY-5667|PWY0-1319|PWY-7411}}
+
{{#set: common name=ORF}}
 +
{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
 +
{{#set: common name=nucleoside_diphosphate_kinase}}
 +
{{#set: ec number=EC-2.7.4.6}}
 +
{{#set: gene associated=Tiso_gene_17272|Tiso_gene_9290|Tiso_gene_18224|Tiso_gene_17271|Tiso_gene_195|Tiso_gene_16529}}
 +
{{#set: in pathway=PWY-7205}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 14:51, 21 March 2018

Reaction CDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • adenylate_kinase_domain-containing_protein_1
    • nucleoside_diphosphate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CDP[c] + 1 ATP[c] => 1 CTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7205, CMP phosphorylation: PWY-7205
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18518&oldid=30808"