Difference between revisions of "Tiso gene 11030"

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(Created page with "Category:Gene == Gene Tiso_gene_8480 == * left end position: ** 6301 * transcription direction: ** POSITIVE * right end position: ** 8785 * centisome position: ** 61.81693...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate--GcvH protein ligas...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_8480 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1141 RXN0-1141] ==
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* left end position:
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* direction:
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** 6301
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** lipoate--GcvH protein ligase
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* right end position:
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** lipoate-protein_ligase_a
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** 8785
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** lipoate-protein_ligase
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* centisome position:
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* ec number:
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** 61.816933   
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** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.7.11.24-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[Gcv-H]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTEIN-LIPOYLLYSINE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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* [[PROTEIN-KINASE-RXN]]
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** 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] '''+''' 1 (R)-lipoate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-8443]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* Gene: [[Tiso_gene_4493]]
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* [[PWY-5381]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17216]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_4494]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_8713]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_17215]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6301}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=lipoate--GcvH protein ligase}}
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{{#set: right end position=8785}}
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{{#set: common name=lipoate-protein_ligase_a}}
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{{#set: centisome position=61.816933    }}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: reaction associated=2.7.11.24-RXN|PROTEIN-KINASE-RXN|RXN-8443}}
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{{#set: ec number=EC-6.3.1.20}}
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{{#set: pathway associated=PWY-5381}}
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{{#set: gene associated=Tiso_gene_4493|Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_8713|Tiso_gene_17215}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:58, 21 March 2018

Reaction RXN0-1141

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoate--GcvH protein ligase
    • lipoate-protein_ligase_a
    • lipoate-protein_ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 [glycine cleavage system lipoyl-carrier protein]-L-lysine[c] + 1 (R)-lipoate[c] + 1 ATP[c] => 1 diphosphate[c] + 1 a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine[c] + 1 AMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11030&oldid=31585"