Difference between revisions of "P281-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACP-S-ACETYLTRANSFER-RXN ACP-S-ACETYLTRANSFER-RXN] == * direction: ** REVERSIBLE * common name: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP5N AMP5N] == * direction: ** LEFT-TO-RIGHT * common name: ** AMP-5'-nucleotidase * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACP-S-ACETYLTRANSFER-RXN ACP-S-ACETYLTRANSFER-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP5N AMP5N] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
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** AMP-5'-nucleotidase
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.38 EC-2.3.1.38]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACP]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETYL-ACP]][c]
+
** 1.0 [[WATER]][c] '''+''' 1.0 [[AMP]][c] '''=>''' 1.0 [[Pi]][c] '''+''' 1.0 [[ADENOSINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a holo-[acyl-carrier protein][c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 an acetyl-[acp][c]
+
** 1.0 H2O[c] '''+''' 1.0 AMP[c] '''=>''' 1.0 phosphate[c] '''+''' 1.0 adenosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15991]]
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* Gene: [[Tiso_gene_9166]]
−
** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-creinhardtii]]
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** [[pantograph]]-[[athaliana]]
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* Gene: [[Tiso_gene_6988]]
−
** [[pantograph]]-[[synechocystis]]
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** Source: [[orthology-creinhardtii]]
−
* [[Tiso_gene_135]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_136]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
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−
* [[Tiso_gene_13394]]
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−
** IN-SILICO_ANNOTATION
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−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
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−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5966]], fatty acid biosynthesis initiation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5966 PWY-5966]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[FASYN-INITIAL-PWY]], superpathway of fatty acid biosynthesis initiation (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01624 R01624]
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{{#set: common name=AMP-5'-nucleotidase}}
−
* UNIPROT:
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{{#set: gene associated=Tiso_gene_9166|Tiso_gene_6988}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P08757 P08757]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P07149 P07149]
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{{#set: reconstruction source=orthology-creinhardtii}}
−
** [http://www.uniprot.org/uniprot/P12276 P12276]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P12785 P12785]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=polyketide_synthase}}
+
−
{{#set: ec number=EC-2.3.1.86}}
+
−
{{#set: ec number=EC-2.3.1.85}}
+
−
{{#set: ec number=EC-2.3.1.38}}
+
−
{{#set: gene associated=Tiso_gene_15991|Tiso_gene_135|Tiso_gene_136|Tiso_gene_13394|Tiso_gene_500|Tiso_gene_10876}}
+
−
{{#set: in pathway=PWY-5966|FASYN-INITIAL-PWY}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=manual-primary_network|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 15:20, 21 March 2018

Reaction AMP5N

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • AMP-5'-nucleotidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O[c] + 1.0 AMP[c] => 1.0 phosphate[c] + 1.0 adenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P281-PWY&oldid=33618"